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Pate5 Gene Detail
Summary
  • Symbol
    Pate5
  • Name
    prostate and testis expressed 5
  • Synonyms
    9230110F15Rik, Anlp2, D730048I06Rik, mANLP3, Pate-A, Pate-C
  • Feature Type
    protein coding gene
  • IDs
    MGI:3839959
    NCBI Gene: 77080
  • Alliance
  • Transcription Start Sites
    5 TSS
Location &
Maps
more
  • Sequence Map
    Chr9:35749625-35755446 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 9, 20.48 cM, cytoband A5.3
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    72 from dbSNP Build 142
  • Strain Annotations
    15
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3839959
protein coding gene Chr9:35749625-35755446 (-)
129S1/SvImJ no annotation
A/J MGP_AJ_G0034525
protein coding gene Chr9:32804799-32811787 (-)
AKR/J MGP_AKRJ_G0034451
protein coding gene Chr9:33517084-33822702 (-)
BALB/cJ MGP_BALBcJ_G0034517
protein coding gene Chr9:32987461-32993291 (-)
C3H/HeJ MGP_C3HHeJ_G0034228
protein coding gene Chr9:33857028-34258679 (-)
C57BL/6NJ MGP_C57BL6NJ_G0035037
protein coding gene Chr9:35110115-35111243 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0031967
protein coding gene Chr9:31422200-31428063 (-)
CAST/EiJ no annotation
CBA/J MGP_CBAJ_G0034202
protein coding gene Chr9:36261374-36269832 (-)
DBA/2J MGP_DBA2J_G0034359
protein coding gene Chr9:32808895-33143732 (-)
FVB/NJ no annotation
LP/J MGP_LPJ_G0034447
protein coding gene Chr9:34252539-34260051 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0034346
protein coding gene Chr9:37551446-37557873 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0035058
protein coding gene Chr9:33813076-33827198 (-)
PWK/PhJ MGP_PWKPhJ_G0033256
protein coding gene Chr9:32775253-33075056 (-)
SPRET/EiJ MGP_SPRETEiJ_G0033091
protein coding gene Chr9:33777223-33782319 (-)
WSB/EiJ MGP_WSBEiJ_G0033666
protein coding gene Chr9:33557493-33563312 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • cDNA Data
Interactions
less
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic 77080 NCBI Gene Model | MGI Sequence Detail 5822 C57BL/6J ±  kb
transcript NM_029863 RefSeq | MGI Sequence Detail 1135 C57BL/6  
polypeptide NP_084139 RefSeq | MGI Sequence Detail 117 C57BL/6  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
Molecular
Reagents
less
  • All nucleic 2
    cDNA 2

    Microarray probesets 2
Other
Accession IDs
less
MGI:1924330
References
more
  • Summaries
    All 20
    Phenotypes 2
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:270449 Loughner CL, et al., Organization, evolution and functions of the human and mouse Ly6/uPAR family genes. Hum Genomics. 2016 Apr 21;10:10

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
11/23/2021
MGI 6.17
The Jackson Laboratory