Gm16325 Gene Detail

Summary

• Symbol
  Gm16325
• Name
  predicted gene 16325

• Feature Type
  lncRNA gene
• IDs
  MGI:3826549
  NCBI Gene: 100286843
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr3:146347687-146357470 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, 72.28 cM

Strain
Comparison

• SNPs within 2kb
  401 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3826549	lncRNA gene	Chr3:146347687-146357470 (+)
129S1/SvImJ	ENSMUSG00200003769	lncRNA gene	Chr3:143269331-143279116 (+)
A/J	ENSMUSG00195003538	lncRNA gene	Chr3:143382024-143391812 (+)
AKR/J	ENSMUSG00220000501	lncRNA gene	Chr3:141797227-141807004 (+)
BALB/cJ	ENSMUSG00180028323	lncRNA gene	Chr3:143252443-143262224 (+)
C3H/HeJ	ENSMUSG00175019414	lncRNA gene	Chr3:142834395-142844179 (+)
C57BL/6NJ	ENSMUSG00215023872	lncRNA gene	Chr3:143537306-143547091 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0003467	antisense lncRNA gene	Chr3:139831767-139841560 (+)
CAST/EiJ	ENSTCUG00005001447	lncRNA gene	Chr3:143931796-143941566 (+)
CBA/J	ENSMUSG00210005221	lncRNA gene	Chr3:143511747-143521531 (+)
DBA/2J	ENSMUSG00185025529	lncRNA gene	Chr3:144102333-144112108 (+)
FVB/NJ	ENSMUSG00205026777	lncRNA gene	Chr3:142377359-142387121 (+)
JF1/MsJ	ENSUMUG00000035023	lncRNA gene	Chr3:142904130-142913933 (+)
LP/J	ENSMUSG00230019315	lncRNA gene	Chr3:146022724-146032509 (+)
NOD/ShiLtJ	ENSMUSG00190004713	lncRNA gene	Chr3:144471957-144481759 (+)
NZO/HlLtJ	ENSMUSG00225002871	lncRNA gene	Chr3:148533621-148543413 (+)
PWK/PhJ	ENSLUMG00010022097	lncRNA gene	Chr3:142813984-142823834 (+)
SPRET/EiJ	ENSMSPG00010008429	lncRNA gene	Chr3:144108596-144118411 (+)
WSB/EiJ	ENSIUOG00005015541	lncRNA gene	Chr3:143576065-143585854 (+)

Homology

• Gene Tree
  Gm16325
  

Human Diseases

• References
  1 with disease annotations

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Radiation induced
  1
• Genomic Mutations
  1 involving Gm16325
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  27
• RefSeq
  1

• Ensembl
  ENSMUSG00000085810 (Evidence)
• NCBI Gene
  100286843

Representative Sequences			Length	Strain/Species
genomic	100286843	NCBI Gene Model | MGI Sequence Detail	9784	C57BL/6J
transcript	NR_045949	RefSeq | MGI Sequence Detail	3174	C57BL/6

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 10

  Diseases 1

  Phenotypes 2
• Earliest
  J:70677 Cook SA, et al., Mouse paracentric inversion In(3)55Rk mutates the urate oxidase gene. Cytogenet Cell Genet. 2001;93(1-2):77-82
• Latest
  J:302829 Lu J, et al., Mouse models for human hyperuricaemia: a critical review. Nat Rev Rheumatol. 2019 Jul;15(7):413-426