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Snord65 Gene Detail
Summary
  • Symbol
    Snord65
  • Name
    small nucleolar RNA, C/D box 65
  • Synonyms
    MBII-135, snoRNA135
Location &
Maps
more
  • Sequence Map
    Chr11:62495356-62495412 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 11, 38.51 cM
Strain
Comparison
more
  • SNPs within 2kb
    76 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3819547
 snoRNA gene Chr11:62495341-62495412 (+)
129S1/SvImJ ENSMUSG00200037075
 snoRNA gene Chr11:59418080-59418151 (+)
A/J ENSMUSG00195042155
 snoRNA gene Chr11:59456376-59456447 (+)
AKR/J ENSMUSG00220050296
 snoRNA gene Chr11:59559577-59559648 (+)
BALB/cJ ENSMUSG00180049914
 snoRNA gene Chr11:59509165-59509236 (+)
C3H/HeJ ENSMUSG00175049770
 snoRNA gene Chr11:59473196-59473267 (+)
C57BL/6NJ ENSMUSG00215040931
 snoRNA gene Chr11:59216278-59216349 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0035864
 snoRNA gene Chr11:57429435-57429506 (+)
CAST/EiJ ENSTCUG00005047990
 snoRNA gene Chr11:59029631-59029702 (+)
CBA/J ENSMUSG00210039180
 snoRNA gene Chr11:59306573-59306644 (+)
DBA/2J ENSMUSG00185044520
 snoRNA gene Chr11:59498888-59498959 (+)
FVB/NJ ENSMUSG00205052169
 snoRNA gene Chr11:59375519-59375590 (+)
JF1/MsJ ENSUMUG00000049237
 snoRNA gene Chr11:59928964-59929035 (+)
LP/J ENSMUSG00230054064
 snoRNA gene Chr11:60639272-60639343 (+)
NOD/ShiLtJ ENSMUSG00190052378
 snoRNA gene Chr11:59485466-59485537 (+)
NZO/HlLtJ ENSMUSG00225048089
 snoRNA gene Chr11:62785118-62785189 (+)
PWK/PhJ ENSLUMG00010035761
 snoRNA gene Chr11:59444352-59444423 (+)
SPRET/EiJ ENSMSPG00010043787
 snoRNA gene Chr11:60111708-60111779 (+)
WSB/EiJ ENSIUOG00005040290
 snoRNA gene Chr11:59410367-59410438 (+)



Homology
less
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    2
  • GO References
    1
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
  • Literature Summary
    1
Sequences &
Gene Models
less
  • All Sequences
    24
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 100217444 NCBI Gene Model | MGI Sequence Detail 57 C57BL/6J ±  kb
transcript NR_028541 RefSeq | MGI Sequence Detail 57 Not Specified  
For the selected sequence
References
more
  • Summaries
    All 10
    Developmental Gene Expression 1
    Gene Ontology 1
  • Earliest
    J:69860 Huttenhofer A, et al., RNomics: an experimental approach that identifies 201 candidates for novel, small, non-messenger RNAs in mouse. EMBO J. 2001 Jun 1;20(11):2943-53
  • Latest
    J:163670 Spruce T, et al., An early developmental role for miRNAs in the maintenance of extraembryonic stem cells in the mouse embryo. Dev Cell. 2010 Aug 17;19(2):207-19
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
10/06/2026
MGI 6.29 		The Jackson Laboratory