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Snord45c Gene Detail
Summary
  • Symbol
    Snord45c
  • Name
    small nucleolar RNA, C/D box 45C
  • Synonyms
    MBII-401, U45C
Location &
Maps
more
  • Sequence Map
    Chr3:153617766-153617826 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 3, 78.76 cM
Strain
Comparison
more
  • SNPs within 2kb
    112 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3819536
 snoRNA gene Chr3:153617762-153617841 (-)
129S1/SvImJ ENSMUSG00200003824
 snoRNA gene Chr3:150587102-150587181 (-)
A/J ENSMUSG00195003600
 snoRNA gene Chr3:150704305-150704384 (-)
AKR/J ENSMUSG00220000438
 snoRNA gene Chr3:149108826-149108905 (-)
BALB/cJ ENSMUSG00180026868
 snoRNA gene Chr3:150556274-150556353 (-)
C3H/HeJ ENSMUSG00175019716
 snoRNA gene Chr3:150172841-150172920 (-)
C57BL/6NJ ENSMUSG00215023758
 snoRNA gene Chr3:150816246-150816325 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0036383
 snoRNA gene Chr3:146904302-146904381 (-)
CAST/EiJ ENSTCUG00005001251
 snoRNA gene Chr3:151228781-151228860 (-)
CBA/J ENSMUSG00210004972
 snoRNA gene Chr3:150812784-150812863 (-)
DBA/2J ENSMUSG00185025384
 snoRNA gene Chr3:151442396-151442475 (-)
FVB/NJ ENSMUSG00205009248
 snoRNA gene Chr3:149742101-149742180 (-)
JF1/MsJ ENSUMUG00000033926
 snoRNA gene Chr3:150207405-150207484 (-)
LP/J ENSMUSG00230009954
 snoRNA gene Chr3:153336164-153336243 (-)
NOD/ShiLtJ ENSMUSG00190004653
 snoRNA gene Chr3:151796497-151796576 (-)
NZO/HlLtJ ENSMUSG00225006334
 snoRNA gene Chr3:155837064-155837143 (-)
PWK/PhJ ENSLUMG00010001890
 snoRNA gene Chr3:150133648-150133727 (-)
SPRET/EiJ ENSMSPG00010008790
 snoRNA gene Chr3:151457788-151457867 (-)
WSB/EiJ ENSIUOG00005015393
 snoRNA gene Chr3:150907185-150907264 (-)



Homology
less
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    2
  • GO References
    1
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
Sequences &
Gene Models
less
  • All Sequences
    24
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 100217425 NCBI Gene Model | MGI Sequence Detail 61 C57BL/6J ±  kb
transcript NR_028525 RefSeq | MGI Sequence Detail 61 Not Specified  
For the selected sequence
References
more
  • Summaries
    All 9
    Gene Ontology 1
  • Earliest
    J:69860 Huttenhofer A, et al., RNomics: an experimental approach that identifies 201 candidates for novel, small, non-messenger RNAs in mouse. EMBO J. 2001 Jun 1;20(11):2943-53
  • Latest
    J:69869 Baran V, et al., Nopp 140 involvement in nucleologenesis of mouse preimplantation embryos. Mol Reprod Dev. 2001 Jul;59(3):277-84
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
10/13/2026
MGI 6.29 		The Jackson Laboratory