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Snord12 Gene Detail
Summary
  • Symbol
    Snord12
  • Name
    small nucleolar RNA, C/D box 12
  • Synonyms
    MBII-99
Location &
Maps
more
  • Sequence Map
    Chr2:166907213-166907278 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 2, 87.22 cM
Strain
Comparison
more
  • SNPs within 2kb
    90 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3819520
 snoRNA gene Chr2:166907196-166907285 (+)
129S1/SvImJ ENSMUSG00200041577
 snoRNA gene Chr2:163781475-163781564 (+)
A/J ENSMUSG00195025138
 snoRNA gene Chr2:164133970-164134059 (+)
AKR/J ENSMUSG00220035783
 snoRNA gene Chr2:163447477-163447566 (+)
BALB/cJ ENSMUSG00180037781
 snoRNA gene Chr2:163587619-163587708 (+)
C3H/HeJ ENSMUSG00175045603
 snoRNA gene Chr2:164359549-164359638 (+)
C57BL/6NJ ENSMUSG00215029018
 snoRNA gene Chr2:163782379-163782468 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0036308
 snoRNA gene Chr2:158997153-158997242 (+)
CAST/EiJ ENSTCUG00005009024
 snoRNA gene Chr2:162678035-162678124 (+)
CBA/J ENSMUSG00210042080
 snoRNA gene Chr2:164267998-164268087 (+)
DBA/2J ENSMUSG00185026410
 snoRNA gene Chr2:163987986-163988075 (+)
FVB/NJ ENSMUSG00205033528
 snoRNA gene Chr2:163014591-163014680 (+)
JF1/MsJ ENSUMUG00000042141
 snoRNA gene Chr2:163626558-163626647 (+)
LP/J ENSMUSG00230013470
 snoRNA gene Chr2:165542341-165542430 (+)
NOD/ShiLtJ ENSMUSG00190042871
 snoRNA gene Chr2:163672920-163673009 (+)
NZO/HlLtJ ENSMUSG00225003239
 snoRNA gene Chr2:173554899-173554988 (+)
PWK/PhJ ENSLUMG00010039143
 snoRNA gene Chr2:163538216-163538305 (+)
SPRET/EiJ ENSMSPG00010028816
 snoRNA gene Chr2:166287851-166287940 (+)
WSB/EiJ ENSIUOG00005026422
 snoRNA gene Chr2:163375579-163375668 (+)



Homology
less
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    2
  • GO References
    1
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
Sequences &
Gene Models
less
  • All Sequences
    24
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 100217443 NCBI Gene Model | MGI Sequence Detail 66 C57BL/6J ±  kb
transcript NR_028540 RefSeq | MGI Sequence Detail 66 Not Specified  
For the selected sequence
References
more
  • Summaries
    All 9
    Gene Ontology 1
  • Earliest
    J:69860 Huttenhofer A, et al., RNomics: an experimental approach that identifies 201 candidates for novel, small, non-messenger RNAs in mouse. EMBO J. 2001 Jun 1;20(11):2943-53
  • Latest
    J:69869 Baran V, et al., Nopp 140 involvement in nucleologenesis of mouse preimplantation embryos. Mol Reprod Dev. 2001 Jul;59(3):277-84
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
10/06/2026
MGI 6.29 		The Jackson Laboratory