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Snord11 Gene Detail
Summary
  • Symbol
    Snord11
  • Name
    small nucleolar RNA, C/D box 11
  • Synonyms
    MBII-95
Location &
Maps
more
  • Sequence Map
    Chr1:59743967-59744029 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
  • Genetic Map
    Chromosome 1, 30.41 cM
Strain
Comparison
more
  • SNPs within 2kb
    19 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3819516
snoRNA gene Chr1:59743949-59744032 (+)
129S1/SvImJ MGP_129S1SvImJ_G0038406
snoRNA gene Chr1:59684856-59684939 (+)
A/J MGP_AJ_G0038397
snoRNA gene Chr1:57610589-57610672 (+)
AKR/J MGP_AKRJ_G0038334
snoRNA gene Chr1:59229632-59229715 (+)
BALB/cJ MGP_BALBcJ_G0038383
snoRNA gene Chr1:57639255-57639338 (+)
C3H/HeJ MGP_C3HHeJ_G0038046
snoRNA gene Chr1:59468631-59468714 (+)
C57BL/6NJ MGP_C57BL6NJ_G0038921
snoRNA gene Chr1:62037238-62037321 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0035706
snoRNA gene Chr1:53821515-53821598 (+)
CAST/EiJ MGP_CASTEiJ_G0037192
snoRNA gene Chr1:58646318-58646401 (+)
CBA/J MGP_CBAJ_G0038018
snoRNA gene Chr1:63973068-63973151 (+)
DBA/2J MGP_DBA2J_G0038209
snoRNA gene Chr1:57037748-57037831 (+)
FVB/NJ MGP_FVBNJ_G0038159
snoRNA gene Chr1:56339368-56339451 (+)
LP/J MGP_LPJ_G0038248
snoRNA gene Chr1:60580689-60580772 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0038158
snoRNA gene Chr1:66890141-66890224 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0039030
snoRNA gene Chr1:59131941-59132024 (+)
PWK/PhJ MGP_PWKPhJ_G0036881
snoRNA gene Chr1:56374530-56374613 (+)
SPRET/EiJ MGP_SPRETEiJ_G0036636
snoRNA gene Chr1:58668375-58668458 (+)
WSB/EiJ MGP_WSBEiJ_G0037422
snoRNA gene Chr1:58835598-58835681 (+)



Homology
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Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    1 phenotype from 1 allele in 1 genetic background
    2 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
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Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Comparison Matrix
  • Sequences &
    Gene Models
    less
    • All Sequences
    • RefSeq
    Representative SequencesLengthStrain/SpeciesFlank
    genomic 100217421 NCBI Gene Model | MGI Sequence Detail 63 C57BL/6J ±  kb
    transcript NR_028521 RefSeq | MGI Sequence Detail 63 Not Specified  
    For the selected sequence
    References
    more
    • Summaries
      All 8
      Phenotypes 2
    • Earliest
      J:69860 Huttenhofer A, et al., RNomics: an experimental approach that identifies 201 candidates for novel, small, non-messenger RNAs in mouse. EMBO J. 2001 Jun 1;20(11):2943-53

    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
    Citing These Resources
    Funding Information
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    last database update
    03/19/2024
    MGI 6.23
    The Jackson Laboratory