Snora19 Gene Detail

Summary

• Symbol
  Snora19
• Name
  small nucleolar RNA, H/ACA box 19
• Synonyms
  ACA19, MBI-51

• Feature Type
  snoRNA gene
• IDs
  MGI:3819491
  NCBI Gene: 100217439
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr19:60762768-60762823 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 19, 56.52 cM

Strain
Comparison

• SNPs within 2kb
  87 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3819491	snoRNA gene	Chr19:60762768-60762899 (-)
129S1/SvImJ	ENSMUSG00200015406	snoRNA gene	Chr19:57470011-57470142 (-)
A/J	ENSMUSG00195002606	snoRNA gene	Chr19:57648670-57648801 (-)
AKR/J	ENSMUSG00220018188	snoRNA gene	Chr19:57398085-57398216 (-)
BALB/cJ	ENSMUSG00180020476	snoRNA gene	Chr19:57888615-57888746 (-)
C3H/HeJ	ENSMUSG00175023273	snoRNA gene	Chr19:57429554-57429685 (-)
C57BL/6NJ	ENSMUSG00215026365	snoRNA gene	Chr19:57498992-57499123 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005015829	snoRNA gene	Chr19:57059244-57059375 (-)
CBA/J	ENSMUSG00210021288	snoRNA gene	Chr19:57509500-57509631 (-)
DBA/2J	ENSMUSG00185028560	snoRNA gene	Chr19:58005452-58005583 (-)
FVB/NJ	ENSMUSG00205003636	snoRNA gene	Chr19:56896548-56896679 (-)
JF1/MsJ	ENSUMUG00000039939	snoRNA gene	Chr19:58204937-58205068 (-)
LP/J	no annotation
NOD/ShiLtJ	ENSMUSG00190013826	snoRNA gene	Chr19:57434670-57434801 (-)
NZO/HlLtJ	ENSMUSG00225021252	snoRNA gene	Chr19:62375680-62375811 (-)
PWK/PhJ	ENSLUMG00010018919	snoRNA gene	Chr19:57235699-57235830 (-)
SPRET/EiJ	ENSMSPG00010003334	snoRNA gene	Chr19:57078400-57078531 (-)
WSB/EiJ	ENSIUOG00005025449	snoRNA gene	Chr19:56847763-56847894 (-)

Homology

• Gene Tree
  Snora19
  

Expression

• Other Mouse Links
  GEO

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00002075991 (Evidence)
• NCBI Gene
  100217439

Representative Sequences			Length	Strain/Species
genomic	100217439	NCBI Gene Model | MGI Sequence Detail	56	C57BL/6J
transcript	NR_034047	RefSeq | MGI Sequence Detail	56	Not Specified

References

• Summaries
  All 6
• Earliest
  J:69860 Huttenhofer A, et al., RNomics: an experimental approach that identifies 201 candidates for novel, small, non-messenger RNAs in mouse. EMBO J. 2001 Jun 1;20(11):2943-53
• Latest
  J:69869 Baran V, et al., Nopp 140 involvement in nucleologenesis of mouse preimplantation embryos. Mol Reprod Dev. 2001 Jul;59(3):277-84