Gm15952 MGI Mouse Gene Detail - MGI:3802149

Sequence Map

Chr3:35987227-36009561 bp, + strand
From NCBI annotation of GRCm39
View this region in JBrowse
Genome Browsers

Ensembl | UCSC | NCBI

For selected strains:

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3802149	lncRNA gene	Chr3:35987194-36044989 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0003733	antisense lncRNA gene	Chr3:33685558-33747243 (+)
A/J	MGP_AJ_G0003714	antisense lncRNA gene	Chr3:33061152-33118740 (+)
AKR/J	MGP_AKRJ_G0003691	antisense lncRNA gene	Chr3:33659715-33717370 (+)
BALB/cJ	MGP_BALBcJ_G0003703	antisense lncRNA gene	Chr3:32817239-32877377 (+)
C3H/HeJ	MGP_C3HHeJ_G0003650	antisense lncRNA gene	Chr3:33734292-33791817 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0003843	antisense lncRNA gene	Chr3:35325416-35383729 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0003348	antisense lncRNA gene	Chr3:30788528-30847125 (+)
CAST/EiJ	MGP_CASTEiJ_G0003613	antisense lncRNA gene	Chr3:33570167-33629469 (+)
CBA/J	MGP_CBAJ_G0003646	antisense lncRNA gene	Chr3:36261142-36322105 (+)
DBA/2J	MGP_DBA2J_G0003655	antisense lncRNA gene	Chr3:32535464-32593584 (+)
FVB/NJ	MGP_FVBNJ_G0003676	antisense lncRNA gene	Chr3:31976824-32038078 (+)
LP/J	MGP_LPJ_G0003734	antisense lncRNA gene	Chr3:34464398-34522895 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0003664	antisense lncRNA gene	Chr3:38720933-38779390 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0003844	antisense lncRNA gene	Chr3:33507108-33565568 (+)
PWK/PhJ	MGP_PWKPhJ_G0003569	antisense lncRNA gene	Chr3:32182699-32240561 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0003512	antisense lncRNA gene	Chr3:32884227-32946545 (+)
WSB/EiJ	MGP_WSBEiJ_G0003649	antisense lncRNA gene	Chr3:33536208-33596307 (+)

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Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.

Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.

Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.

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Expression Overview

GXD's primary emphasis is on endogenous gene expression during development. Click on grid cells to view annotations.

Blue cells = expressed in wild-type.
Gray triangles = other expression annotations only
(e.g. absence of expression or data from mutants).

early conceptus	embryo ectoderm	embryo endoderm	embryo mesoderm	embryo mesenchyme	extraembryonic component	alimentary system	auditory system	branchial arches	cardiovascular system	connective tissue	endocrine system	exocrine system	hemolymphoid system	integumental system	limbs	liver and biliary system	musculoskeletal system	nervous system	olfactory system	reproductive system	respiratory system	urinary system	visual system

Click cells to view annotations.

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Representative Sequences				Length	Strain/Species	Flank
	genomic	102639351	NCBI Gene Model \| MGI Sequence Detail	22335	C57BL/6J	± kb
	transcript	XR_880768	RefSeq \| MGI Sequence Detail	3481	C57BL/6J

Summaries

All 8

Diseases 1

Phenotypes 2
Earliest

J:70677 Cook SA, et al., Mouse paracentric inversion In(3)55Rk mutates the urate oxidase gene. Cytogenet Cell Genet. 2001;93(1-2):77-82
Latest

J:302829 Lu J, et al., Mouse models for human hyperuricaemia: a critical review. Nat Rev Rheumatol. 2019 Jul;15(7):413-426

TSS for Gm15952:

(View these features in JBrowse)

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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