Gm16140 MGI Mouse Gene Detail - MGI:3802123

Sequence Map

Chr11:18959128-18961183 bp, + strand
From Ensembl annotation of GRCm39
View this region in JBrowse
Genome Browsers

Ensembl | UCSC | NCBI

For selected strains:

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3802123	lncRNA gene	Chr11:18959128-18961183 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0002925	antisense lncRNA gene	Chr11:16431142-16433192 (+)
A/J	MGP_AJ_G0002902	antisense lncRNA gene	Chr11:15892458-15894511 (+)
AKR/J	MGP_AKRJ_G0002883	antisense lncRNA gene	Chr11:16441163-16443214 (+)
BALB/cJ	MGP_BALBcJ_G0002890	antisense lncRNA gene	Chr11:16005833-16007881 (+)
C3H/HeJ	MGP_C3HHeJ_G0002845	antisense lncRNA gene	Chr11:16372824-16374914 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0003032	antisense lncRNA gene	Chr11:17186521-17188618 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0002574	antisense lncRNA gene	Chr11:14954993-14957043 (+)
CAST/EiJ	MGP_CASTEiJ_G0002817	antisense lncRNA gene	Chr11:16317160-16319204 (+)
CBA/J	MGP_CBAJ_G0002842	antisense lncRNA gene	Chr11:17922501-17924550 (+)
DBA/2J	MGP_DBA2J_G0002849	antisense lncRNA gene	Chr11:15875256-15877313 (+)
FVB/NJ	MGP_FVBNJ_G0002868	antisense lncRNA gene	Chr11:15612617-15614672 (+)
LP/J	MGP_LPJ_G0002924	antisense lncRNA gene	Chr11:16598782-16600838 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0002856	antisense lncRNA gene	Chr11:18421212-18423269 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0003035	antisense lncRNA gene	Chr11:16529249-16531325 (+)
PWK/PhJ	MGP_PWKPhJ_G0002775	antisense lncRNA gene	Chr11:15822039-15824130 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0002724	antisense lncRNA gene	Chr11:16254381-16256427 (+)
WSB/EiJ	MGP_WSBEiJ_G0002846	antisense lncRNA gene	Chr11:16210954-16213008 (+)

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Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.

Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.

Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.

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Expression Overview

GXD's primary emphasis is on endogenous gene expression during development. Click on grid cells to view annotations.

Blue cells = expressed in wild-type.
Gray triangles = other expression annotations only
(e.g. absence of expression or data from mutants).

early conceptus	embryo ectoderm	embryo endoderm	embryo mesoderm	embryo mesenchyme	extraembryonic component	alimentary system	auditory system	branchial arches	cardiovascular system	connective tissue	endocrine system	exocrine system	hemolymphoid system	integumental system	limbs	liver and biliary system	musculoskeletal system	nervous system	olfactory system	reproductive system	respiratory system	urinary system	visual system

Click cells to view annotations.

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Representative Sequences				Length	Strain/Species	Flank
	genomic	ENSMUSG00000084085	Ensembl Gene Model \| MGI Sequence Detail	2056	C57BL/6J	± kb
	transcript	ENSMUST00000117191	Ensembl \| MGI Sequence Detail	1060	Not Applicable

Summaries

All 7

Phenotypes 3
Earliest

J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6

TSS for Gm16140:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr3435	Chr11:18959079-18959098 (+)	-39 bp

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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