Rpl17-ps11 Pseudogene Detail

Summary

• Symbol
  Rpl17-ps11
• Name
  ribosomal protein L17, pseudogene 11
• Synonyms
  Gm16207

• Feature Type
  pseudogene
• IDs
  MGI:3802112
  NCBI Gene: 100418003
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr10:11262625-11263348 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, 3.66 cM

Strain
Comparison

• SNPs within 2kb
  42 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3802112	pseudogene	Chr10:11262619-11263348 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0010493	pseudogene	Chr10:8761915-8762643 (-)
A/J	MGP_AJ_G0010483	pseudogene	Chr10:8370142-8370870 (-)
AKR/J	MGP_AKRJ_G0010449	pseudogene	Chr10:8577699-8578427 (-)
BALB/cJ	MGP_BALBcJ_G0010456	pseudogene	Chr10:8387080-8387808 (-)
C3H/HeJ	MGP_C3HHeJ_G0010388	pseudogene	Chr10:8735639-8736367 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0010729	pseudogene	Chr10:8969149-8969877 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0009402	pseudogene	Chr10:7763364-7764095 (-)
CAST/EiJ	MGP_CASTEiJ_G0010206	pseudogene	Chr10:8605390-8606117 (-)
CBA/J	MGP_CBAJ_G0010354	pseudogene	Chr10:9293038-9293766 (-)
DBA/2J	MGP_DBA2J_G0010385	pseudogene	Chr10:8284148-8284876 (-)
FVB/NJ	MGP_FVBNJ_G0010409	pseudogene	Chr10:8184571-8185299 (-)
LP/J	MGP_LPJ_G0010475	pseudogene	Chr10:8560897-8561625 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0010374	pseudogene	Chr10:9225574-9226302 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0010699	pseudogene	Chr10:8509081-8509809 (-)
PWK/PhJ	MGP_PWKPhJ_G0010109	pseudogene	Chr10:8199939-8200666 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0009924	pseudogene	Chr10:8558683-8559408 (-)
WSB/EiJ	MGP_WSBEiJ_G0010276	pseudogene	Chr10:8534306-8535034 (-)

Homology

• Gene Tree
  Rpl17-ps11
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000090242 (Evidence)
• NCBI Gene
  100418003

Representative Sequences			Length	Strain/Species
genomic	100418003	NCBI Gene Model | MGI Sequence Detail	724	C57BL/6J

References

• Summaries
  All 5
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;