Gm15901 Pseudogene Detail

Summary

• Symbol
  Gm15901
• Name
  predicted gene 15901

• Feature Type
  pseudogene
• IDs
  MGI:3802080
  NCBI Gene: 100416070
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr12:44969980-44971126 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 12, 20.73 cM

Strain
Comparison

• SNPs within 2kb
  32 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3802080	pseudogene	Chr12:44969963-44971156 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0010898	pseudogene	Chr12:43523817-43525286 (+)
A/J	MGP_AJ_G0010902	pseudogene	Chr12:41923077-41924262 (+)
AKR/J	MGP_AKRJ_G0010856	pseudogene	Chr12:43279541-43280640 (+)
BALB/cJ	MGP_BALBcJ_G0010878	pseudogene	Chr12:42232727-42233857 (+)
C3H/HeJ	MGP_C3HHeJ_G0010776	pseudogene	Chr12:43252020-43254187 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0011150	pseudogene	Chr12:44776642-44779544 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0009763	pseudogene	Chr12:40899861-40900765 (+)
CAST/EiJ	MGP_CASTEiJ_G0010605	pseudogene	Chr12:38414003-38417952 (+)
CBA/J	MGP_CBAJ_G0010750	pseudogene	Chr12:46229138-46232516 (+)
DBA/2J	MGP_DBA2J_G0010795	pseudogene	Chr12:41791676-41792735 (+)
FVB/NJ	MGP_FVBNJ_G0010807	pseudogene	Chr12:41337248-41338870 (+)
LP/J	MGP_LPJ_G0010880	pseudogene	Chr12:43482605-43483700 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0010789	pseudogene	Chr12:46949657-46950755 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0011133	pseudogene	Chr12:42809753-42810653 (+)
PWK/PhJ	MGP_PWKPhJ_G0010495	pseudogene	Chr12:36455679-36456579 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0010308	pseudogene	Chr12:37427813-37428919 (+)
WSB/EiJ	MGP_WSBEiJ_G0010654	pseudogene	Chr12:43136139-43137240 (+)

Homology

• Gene Tree
  Gm15901
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000081636 (Evidence)
• NCBI Gene
  100416070

Representative Sequences			Length	Strain/Species
genomic	100416070	NCBI Gene Model | MGI Sequence Detail	1147	C57BL/6J

References

• Summaries
  All 5
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;