Gm15957 Pseudogene Detail

Summary

• Symbol
  Gm15957
• Name
  predicted gene 15957

• Feature Type
  pseudogene
• IDs
  MGI:3802074
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr18:77306050-77307023 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 18, 52.15 cM

Strain
Comparison

• SNPs within 2kb
  20 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3802074	pseudogene	Chr18:77306050-77307023 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0011454	pseudogene	Chr18:77961486-77962459 (-)
A/J	MGP_AJ_G0011456	pseudogene	Chr18:74562922-74563895 (-)
AKR/J	MGP_AKRJ_G0011420	pseudogene	Chr18:76753656-76754629 (-)
BALB/cJ	MGP_BALBcJ_G0011436	pseudogene	Chr18:74775137-74776110 (-)
C3H/HeJ	MGP_C3HHeJ_G0011319	pseudogene	Chr18:76868493-76869466 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0011724	pseudogene	Chr18:80014369-80015342 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0010275	pseudogene	Chr18:73569086-73570062 (-)
CAST/EiJ	MGP_CASTEiJ_G0011123	pseudogene	Chr18:77151382-77152355 (-)
CBA/J	MGP_CBAJ_G0011294	pseudogene	Chr18:82829161-82830134 (-)
DBA/2J	MGP_DBA2J_G0011349	pseudogene	Chr18:74138738-74139711 (-)
FVB/NJ	MGP_FVBNJ_G0011354	pseudogene	Chr18:73489578-73490551 (-)
LP/J	MGP_LPJ_G0011417	pseudogene	Chr18:77849121-77850094 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0011348	pseudogene	Chr18:84116145-84117118 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0011709	pseudogene	Chr18:76922389-76923362 (-)
PWK/PhJ	MGP_PWKPhJ_G0010984	pseudogene	Chr18:74554368-74555465 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0010809	pseudogene	Chr18:77110000-77110975 (-)
WSB/EiJ	MGP_WSBEiJ_G0011153	pseudogene	Chr18:76880471-76881444 (-)

Homology

• Gene Tree
  Gm15957
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  1 phenotype reference
  

• All Mutations and Alleles
  1
• Transposon induced
  1
• Genomic Mutations
  1 involving Gm15957
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000082784 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000082784	Ensembl Gene Model | MGI Sequence Detail	974	C57BL/6J
transcript	ENSMUST00000118893	Ensembl | MGI Sequence Detail	974	Not Applicable

References

• Summaries
  All 4

  Phenotypes 1
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:175597 Overbeek PA, Direct Data Submission for Overbeek Lentiviral Transgenic Lines. MGI Direct Data Submission. 2011;