Gm15905 Pseudogene Detail

Summary

• Symbol
  Gm15905
• Name
  predicted gene 15905

• Feature Type
  pseudogene
• IDs
  MGI:3802059
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr10:127756938-127757235 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, 76.39 cM

Strain
Comparison

• SNPs within 2kb
  51 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3802059	pseudogene	Chr10:127756938-127757235 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0010552	pseudogene	Chr10:131574360-131574651 (+)
A/J	MGP_AJ_G0010546	pseudogene	Chr10:126320221-126320512 (+)
AKR/J	MGP_AKRJ_G0010506	pseudogene	Chr10:130032272-130032566 (+)
BALB/cJ	MGP_BALBcJ_G0010520	pseudogene	Chr10:126703779-126704070 (+)
C3H/HeJ	MGP_C3HHeJ_G0010444	pseudogene	Chr10:130171188-130171482 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0010787	pseudogene	Chr10:136031898-136032192 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0009464	pseudogene	Chr10:120281814-120282094 (+)
CAST/EiJ	MGP_CASTEiJ_G0010269	pseudogene	Chr10:130889687-130889978 (+)
CBA/J	MGP_CBAJ_G0010415	pseudogene	Chr10:141565758-141566052 (+)
DBA/2J	MGP_DBA2J_G0010444	pseudogene	Chr10:125394101-125394395 (+)
FVB/NJ	MGP_FVBNJ_G0010462	pseudogene	Chr10:124331012-124331306 (+)
LP/J	MGP_LPJ_G0010533	pseudogene	Chr10:132193805-132194099 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0010439	pseudogene	Chr10:144178794-144179088 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0010767	pseudogene	Chr10:130126913-130127207 (+)
PWK/PhJ	MGP_PWKPhJ_G0010169	pseudogene	Chr10:125624733-125625027 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0009982	pseudogene	Chr10:129207655-129207946 (+)
WSB/EiJ	MGP_WSBEiJ_G0010330	pseudogene	Chr10:130348764-130349058 (+)

Homology

• Gene Tree
  Gm15905
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000085993 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000085993	Ensembl Gene Model | MGI Sequence Detail	298	C57BL/6J
transcript	ENSMUST00000137042	Ensembl | MGI Sequence Detail	298	Not Applicable

References

• Summaries
  All 3
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;