Gm15984 Gene Detail

Summary

• Symbol
  Gm15984
• Name
  predicted gene 15984

• Feature Type
  lncRNA gene
• IDs
  MGI:3802050
  NCBI Gene: 102634697
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr5:74863134-74879899 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, 39.53 cM

Strain
Comparison

• SNPs within 2kb
  185 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3802050	lncRNA gene	Chr5:74863134-74889266 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0004101	antisense lncRNA gene	Chr5:74803225-74831767 (+)
A/J	MGP_AJ_G0004082	antisense lncRNA gene	Chr5:71959007-71984866 (+)
AKR/J	MGP_AKRJ_G0004060	antisense lncRNA gene	Chr5:74313685-74339635 (+)
BALB/cJ	MGP_BALBcJ_G0004068	antisense lncRNA gene	Chr5:72674712-72700809 (+)
C3H/HeJ	MGP_C3HHeJ_G0004014	antisense lncRNA gene	Chr5:74697257-74725346 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0004216	antisense lncRNA gene	Chr5:77823051-77858427 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0003693	antisense lncRNA gene	Chr5:67625570-67652177 (+)
CAST/EiJ	MGP_CASTEiJ_G0003977	antisense lncRNA gene	Chr5:73794026-73827192 (+)
CBA/J	MGP_CBAJ_G0004008	antisense lncRNA gene	Chr5:80404590-80436600 (+)
DBA/2J	MGP_DBA2J_G0004023	antisense lncRNA gene	Chr5:72049878-72075689 (+)
FVB/NJ	MGP_FVBNJ_G0004042	antisense lncRNA gene	Chr5:71192976-71219577 (+)
LP/J	MGP_LPJ_G0004103	antisense lncRNA gene	Chr5:75234919-75263123 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0004031	antisense lncRNA gene	Chr5:83620338-83648710 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0004212	antisense lncRNA gene	Chr5:73839462-73867153 (+)
PWK/PhJ	MGP_PWKPhJ_G0003930	antisense lncRNA gene	Chr5:71014271-71053841 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0003875	antisense lncRNA gene	Chr5:73191593-73218950 (+)
WSB/EiJ	MGP_WSBEiJ_G0004012	antisense lncRNA gene	Chr5:74127826-74154370 (+)

Homology

• Gene Tree
  Gm15984
  

Human Diseases

• References
  1 with disease annotations

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  345 phenotype references
  

• All Mutations and Alleles
  6
• Chemically induced (other)
  2
• Radiation induced
  1
• Spontaneous
  3
• Genomic Mutations
  6 involving Gm15984
• Find Mice (IMSR)
  0 strains or lines available

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  706
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  24
• RefSeq
  1

• Ensembl
  ENSMUSG00000085657 (Evidence)
• NCBI Gene
  102634697

Representative Sequences			Length	Strain/Species
genomic	102634697	NCBI Gene Model | MGI Sequence Detail	16766	C57BL/6J
transcript	AK040684	GenBank | ENA | DDBJ | MGI Sequence Detail	1534	C57BL/6J

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 352

  Diseases 1

  Phenotypes 345
• Earliest
  J:5021 Batchelor AL, et al., A comparison of the mutagenic effectiveness of chronic neutron- and gamma-irradiation of mouse spermatogonia. Mutat Res. 1966 Jun;3(3):218-29
• Latest
  J:341974 Harper RL, et al., Mast cell activation and degranulation in acute artery injury: A target for post-operative therapy. FASEB J. 2023 Jul;37(7):e23029