Gm15916 Pseudogene Detail

Summary

• Symbol
  Gm15916
• Name
  predicted gene 15916

• Feature Type
  pseudogene
• IDs
  MGI:3801989
  NCBI Gene: 100416112
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr14:3637665-3638400 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 14, 7.42 cM

Strain
Comparison

• SNPs within 2kb
  36 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3801989	pseudogene	Chr14:3637627-3638787 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0011076	pseudogene	Chr14:11467381-11468551 (+)
A/J	MGP_AJ_G0011075	pseudogene	Chr14:11139097-11140266 (+)
AKR/J	MGP_AKRJ_G0011032	pseudogene	Chr14:11496184-11497353 (+)
BALB/cJ	MGP_BALBcJ_G0011054	pseudogene	Chr14:11190356-11191525 (+)
C3H/HeJ	MGP_C3HHeJ_G0010950	pseudogene	Chr14:11544601-11545771 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0011333	pseudogene	Chr14:11883035-11884204 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0009922	pseudogene	Chr14:11605491-11606635 (+)
CAST/EiJ	MGP_CASTEiJ_G0010768	pseudogene	Chr14:11399312-11400481 (+)
CBA/J	MGP_CBAJ_G0010922	pseudogene	Chr14:12372249-12373419 (+)
DBA/2J	MGP_DBA2J_G0010969	pseudogene	Chr14:11035187-11036357 (+)
FVB/NJ	MGP_FVBNJ_G0010980	pseudogene	Chr14:10895607-10896776 (+)
LP/J	MGP_LPJ_G0011057	pseudogene	Chr14:11529980-11531150 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0010964	pseudogene	Chr14:12270468-12271637 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0011314	pseudogene	Chr14:11358660-11359829 (+)
PWK/PhJ	MGP_PWKPhJ_G0010641	pseudogene	Chr14:11065364-11066534 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0010463	pseudogene	Chr14:11487807-11488975 (+)
WSB/EiJ	MGP_WSBEiJ_G0010821	pseudogene	Chr14:11394185-11395354 (+)

Homology

• Gene Tree
  Gm15916
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000083606 (Evidence)
• NCBI Gene
  100416112

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000083606	Ensembl Gene Model | MGI Sequence Detail	736	C57BL/6J
transcript	ENSMUST00000118355	Ensembl | MGI Sequence Detail	736	Not Applicable

References

• Summaries
  All 5
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;