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Gm15853 Gene Detail
Summary
  • Symbol
    Gm15853
  • Name
    predicted gene 15853
  • Feature Type
    lncRNA gene
  • IDs
    MGI:3801970
    NCBI Gene: 100503318
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr1:166205447-166208062 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 1, 73.74 cM
Strain
Comparison
more
  • SNPs within 2kb
    27 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3801970
 lncRNA gene Chr1:166205447-166208062 (-)
129S1/SvImJ MGP_129S1SvImJ_G0005031
 lincRNA gene Chr1:171901654-171903686 (-)
A/J MGP_AJ_G0005013
 lincRNA gene Chr1:164906393-164908433 (-)
AKR/J MGP_AKRJ_G0004991
 lincRNA gene Chr1:169877407-169879441 (-)
BALB/cJ MGP_BALBcJ_G0004995
 lincRNA gene Chr1:165375844-165377876 (-)
C3H/HeJ MGP_C3HHeJ_G0004943
 lincRNA gene Chr1:170097526-170099554 (-)
C57BL/6NJ MGP_C57BL6NJ_G0005145
 lincRNA gene Chr1:177655000-177657028 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0004555
 lincRNA gene Chr1:156763923-156765790 (-)
CAST/EiJ MGP_CASTEiJ_G0004891
 lincRNA gene Chr1:169692791-169694838 (-)
CBA/J MGP_CBAJ_G0004934
 lincRNA gene Chr1:183970854-183972894 (-)
DBA/2J MGP_DBA2J_G0004953
 lincRNA gene Chr1:163770227-163772291 (-)
FVB/NJ MGP_FVBNJ_G0004974
 lincRNA gene Chr1:162200440-162202488 (-)
LP/J MGP_LPJ_G0005031
 lincRNA gene Chr1:172986082-172988120 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0004958
 lincRNA gene Chr1:191413084-191415124 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0005150
 lincRNA gene Chr1:169740528-169742568 (-)
PWK/PhJ MGP_PWKPhJ_G0004842
 lincRNA gene Chr1:162977514-162979743 (-)
SPRET/EiJ no annotation
WSB/EiJ MGP_WSBEiJ_G0004937
 lincRNA gene Chr1:169883168-169889389 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    19
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000103400 Ensembl Gene Model | MGI Sequence Detail 2616 C57BL/6J ±  kb
transcript ENSMUST00000195518 Ensembl | MGI Sequence Detail 2517 Not Applicable  
For the selected sequence
References
more
  • Summaries
    All 7
    Phenotypes 2
  • Earliest
    J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
  • Latest
    J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory