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Gm16093 Gene Detail
Summary
  • Symbol
    Gm16093
  • Name
    predicted gene 16093
  • Feature Type
    lncRNA gene
  • IDs
    MGI:3801946
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr3:19281944-19295151 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 3, 5.36 cM
Strain
Comparison
more
  • SNPs within 2kb
    145 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3801946
 lncRNA gene Chr3:19281944-19295151 (+)
129S1/SvImJ MGP_129S1SvImJ_G0003720
 antisense lncRNA gene Chr3:16424343-16439456 (+)
A/J MGP_AJ_G0003701
 antisense lncRNA gene Chr3:16358122-16371431 (+)
AKR/J MGP_AKRJ_G0003679
 antisense lncRNA gene Chr3:16501694-16514900 (+)
BALB/cJ MGP_BALBcJ_G0003690
 antisense lncRNA gene Chr3:16118911-16132535 (+)
C3H/HeJ MGP_C3HHeJ_G0003637
 antisense lncRNA gene Chr3:16537239-16550373 (+)
C57BL/6NJ MGP_C57BL6NJ_G0003830
 antisense lncRNA gene Chr3:17495363-17512083 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0003335
 antisense lncRNA gene Chr3:14444849-14460904 (+)
CAST/EiJ MGP_CASTEiJ_G0003600
 antisense lncRNA gene Chr3:16430345-16443553 (+)
CBA/J MGP_CBAJ_G0003634
 antisense lncRNA gene Chr3:17854846-17867986 (+)
DBA/2J MGP_DBA2J_G0003642
 antisense lncRNA gene Chr3:15963740-15976874 (+)
FVB/NJ MGP_FVBNJ_G0003664
 antisense lncRNA gene Chr3:15623351-15636481 (+)
LP/J MGP_LPJ_G0003721
 antisense lncRNA gene Chr3:17057810-17071440 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0003652
 antisense lncRNA gene Chr3:19922691-19936822 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0003831
 antisense lncRNA gene Chr3:16257788-16270545 (+)
PWK/PhJ MGP_PWKPhJ_G0003557
 antisense lncRNA gene Chr3:15676645-15690036 (+)
SPRET/EiJ MGP_SPRETEiJ_G0003499
 antisense lncRNA gene Chr3:16088470-16101706 (+)
WSB/EiJ MGP_WSBEiJ_G0003636
 antisense lncRNA gene Chr3:16311934-16324808 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    20
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000087108 Ensembl Gene Model | MGI Sequence Detail 13208 C57BL/6J ±  kb
transcript ENSMUST00000141455 Ensembl | MGI Sequence Detail 392 Not Applicable  
For the selected sequence
References
more
  • Summaries
    All 6
    Phenotypes 2
  • Earliest
    J:142754 Hansen GM, et al., Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Genome Res. 2008 Oct;18(10):1670-9
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory