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Gm16111 Pseudogene Detail
Summary
  • Symbol
    Gm16111
  • Name
    predicted gene 16111
Location &
Maps
more
  • Sequence Map
    Chr5:22094778-22095062 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 5, 9.98 cM
Strain
Comparison
more
  • SNPs within 2kb
    12 from dbSNP Build 142
  • Strain Annotations
    16
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3801919
 pseudogene Chr5:22094484-22095185 (+)
129S1/SvImJ MGP_129S1SvImJ_G0012996
 pseudogene Chr5:19475794-19476078 (+)
A/J MGP_AJ_G0012983
 pseudogene Chr5:18832939-18833223 (+)
AKR/J MGP_AKRJ_G0012950
 pseudogene Chr5:19556111-19556395 (+)
BALB/cJ MGP_BALBcJ_G0012963
 pseudogene Chr5:19269540-19269824 (+)
C3H/HeJ MGP_C3HHeJ_G0012814
 pseudogene Chr5:19629617-19629901 (+)
C57BL/6NJ MGP_C57BL6NJ_G0013322
 pseudogene Chr5:20884804-20885088 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0011523
 pseudogene Chr5:16889831-16890115 (+)
CAST/EiJ no annotation
CBA/J MGP_CBAJ_G0012783
 pseudogene Chr5:21130852-21131136 (+)
DBA/2J MGP_DBA2J_G0012859
 pseudogene Chr5:19118263-19118547 (+)
FVB/NJ MGP_FVBNJ_G0012861
 pseudogene Chr5:18521690-18521974 (+)
LP/J MGP_LPJ_G0012929
 pseudogene Chr5:19885084-19885368 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0012876
 pseudogene Chr5:22388295-22388579 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0013322
 pseudogene Chr5:19209439-19209723 (+)
PWK/PhJ MGP_PWKPhJ_G0012366
 pseudogene Chr5:18176509-18176793 (+)
SPRET/EiJ no annotation
WSB/EiJ MGP_WSBEiJ_G0012583
 pseudogene Chr5:19276983-19277267 (+)



Homology
less
Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    9 phenotype references
  • All Mutations and Alleles
    4
  • Chemically induced (other)
    2
  • Radiation induced
    1
  • Spontaneous
    1
  • Genomic Mutations
    4 involving Gm16111
  • Find Mice (IMSR)
    0 strains or lines available
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    20
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000090008 Ensembl Gene Model | MGI Sequence Detail 285 C57BL/6J ±  kb
transcript ENSMUST00000162128 Ensembl | MGI Sequence Detail 285 Not Applicable  
For the selected sequence
References
more
  • Summaries
    All 14
    Diseases 1
    Phenotypes 9
  • Earliest
    J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
  • Latest
    J:119563 Alt B, et al., Arteries define the position of the thyroid gland during its developmental relocalisation. Development. 2006 Oct;133(19):3797-804
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory