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Gm15979 Gene Detail
Summary
  • Symbol
    Gm15979
  • Name
    predicted gene 15979
  • Feature Type
    lncRNA gene
  • IDs
    MGI:3801882
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr4:135157437-135158152 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 4, 67.62 cM
Strain
Comparison
more
  • SNPs within 2kb
    30 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3801882
 lncRNA gene Chr4:135157437-135158152 (-)
129S1/SvImJ MGP_129S1SvImJ_G0037016
 sense intronic lncRNA gene Chr4:137867959-137868548 (-)
A/J MGP_AJ_G0037004
 sense intronic lncRNA gene Chr4:132048299-132049014 (-)
AKR/J MGP_AKRJ_G0036952
 sense intronic lncRNA gene Chr4:135854094-135854683 (-)
BALB/cJ MGP_BALBcJ_G0036995
 sense intronic lncRNA gene Chr4:132701543-132702258 (-)
C3H/HeJ MGP_C3HHeJ_G0036682
 sense intronic lncRNA gene Chr4:136122403-136122992 (-)
C57BL/6NJ MGP_C57BL6NJ_G0037508
 sense intronic lncRNA gene Chr4:142800053-142800768 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0034559
 sense intronic lncRNA gene Chr4:125102068-125102720 (-)
CAST/EiJ MGP_CASTEiJ_G0035870
 sense intronic lncRNA gene Chr4:134241108-134241750 (-)
CBA/J MGP_CBAJ_G0036657
 sense intronic lncRNA gene Chr4:146691874-146692463 (-)
DBA/2J MGP_DBA2J_G0036832
 sense intronic lncRNA gene Chr4:132465637-132466352 (-)
FVB/NJ MGP_FVBNJ_G0036782
 sense intronic lncRNA gene Chr4:131384630-131385219 (-)
LP/J MGP_LPJ_G0036879
 sense intronic lncRNA gene Chr4:137975243-137975832 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0036790
 sense intronic lncRNA gene Chr4:151009395-151010110 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0037625
 sense intronic lncRNA gene Chr4:136291037-136291688 (-)
PWK/PhJ MGP_PWKPhJ_G0035562
 sense intronic lncRNA gene Chr4:129235687-129236276 (-)
SPRET/EiJ MGP_SPRETEiJ_G0035371
 sense intronic lncRNA gene Chr4:132122414-132123067 (-)
WSB/EiJ MGP_WSBEiJ_G0036070
 sense intronic lncRNA gene Chr4:136473662-136474377 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    20
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000087016 Ensembl Gene Model | MGI Sequence Detail 716 C57BL/6J ±  kb
transcript ENSMUST00000149741 Ensembl | MGI Sequence Detail 590 Not Applicable  
For the selected sequence
References
more
  • Summaries
    All 7
    Phenotypes 3
  • Earliest
    J:84714 Nishijima I, et al., Two new balancer chromosomes on mouse chromosome 4 to facilitate functional annotation of human chromosome 1p. Genesis. 2003 Jul;36(3):142-8
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory