Gm15956 Gene Detail

Summary

• Symbol
  Gm15956
• Name
  predicted gene 15956

• Feature Type
  lncRNA gene
• IDs
  MGI:3801856
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr18:12326825-12331732 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 18, 6.15 cM

Strain
Comparison

• SNPs within 2kb
  107 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3801856	lncRNA gene	Chr18:12326825-12331732 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0003431	antisense lncRNA gene	Chr18:9349139-9354232 (+)
A/J	MGP_AJ_G0003409	antisense lncRNA gene	Chr18:9200215-9205134 (+)
AKR/J	MGP_AKRJ_G0003390	antisense lncRNA gene	Chr18:9481585-9486501 (+)
BALB/cJ	MGP_BALBcJ_G0003398	antisense lncRNA gene	Chr18:9143340-9148234 (+)
C3H/HeJ	MGP_C3HHeJ_G0003348	antisense lncRNA gene	Chr18:9351365-9356259 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0003538	antisense lncRNA gene	Chr18:9837063-9841970 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0003051	antisense lncRNA gene	Chr18:8778190-8783096 (+)
CAST/EiJ	MGP_CASTEiJ_G0003310	antisense lncRNA gene	Chr18:9227849-9232986 (+)
CBA/J	MGP_CBAJ_G0003344	antisense lncRNA gene	Chr18:9964610-9969504 (+)
DBA/2J	MGP_DBA2J_G0003353	antisense lncRNA gene	Chr18:9044582-9049489 (+)
FVB/NJ	MGP_FVBNJ_G0003371	antisense lncRNA gene	Chr18:8906709-8911601 (+)
LP/J	MGP_LPJ_G0003425	antisense lncRNA gene	Chr18:9450284-9455348 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0003359	antisense lncRNA gene	Chr18:10139246-10144153 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0003540	antisense lncRNA gene	Chr18:9241217-9248281 (+)
PWK/PhJ	MGP_PWKPhJ_G0003269	antisense lncRNA gene	Chr18:9105423-9111689 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0003212	antisense lncRNA gene	Chr18:9503608-9508599 (+)
WSB/EiJ	MGP_WSBEiJ_G0003346	antisense lncRNA gene	Chr18:9245388-9250314 (+)

Homology

• Gene Tree
  Gm15956
  

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000086935 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000086935	Ensembl Gene Model | MGI Sequence Detail	4908	C57BL/6J
transcript	ENSMUST00000153352	Ensembl | MGI Sequence Detail	502	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;