Gm16151 Gene Detail

Summary

• Symbol
  Gm16151
• Name
  predicted gene 16151

• Feature Type
  lncRNA gene
• IDs
  MGI:3801826
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr1:38346983-38351011 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, 16.71 cM

Strain
Comparison

• SNPs within 2kb
  88 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3801826	lncRNA gene	Chr1:38346983-38351011 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0002667	antisense lncRNA gene	Chr1:36970045-36974073 (+)
A/J	MGP_AJ_G0002643	antisense lncRNA gene	Chr1:35970012-35974040 (+)
AKR/J	MGP_AKRJ_G0002623	antisense lncRNA gene	Chr1:36459087-36463101 (+)
BALB/cJ	MGP_BALBcJ_G0002629	antisense lncRNA gene	Chr1:35616358-35620386 (+)
C3H/HeJ	MGP_C3HHeJ_G0002589	antisense lncRNA gene	Chr1:36689889-36693917 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0002773	antisense lncRNA gene	Chr1:38565832-38569860 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0002320	antisense lncRNA gene	Chr1:32934074-32938192 (+)
CAST/EiJ	MGP_CASTEiJ_G0002562	antisense lncRNA gene	Chr1:36547157-36551185 (+)
CBA/J	MGP_CBAJ_G0002584	antisense lncRNA gene	Chr1:39634983-39638997 (+)
DBA/2J	MGP_DBA2J_G0002589	antisense lncRNA gene	Chr1:35260257-35264271 (+)
FVB/NJ	MGP_FVBNJ_G0002609	antisense lncRNA gene	Chr1:34786850-34790878 (+)
LP/J	MGP_LPJ_G0002669	antisense lncRNA gene	Chr1:37329103-37333131 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0002600	antisense lncRNA gene	Chr1:41783061-41787089 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0002778	antisense lncRNA gene	Chr1:36531568-36535582 (+)
PWK/PhJ	MGP_PWKPhJ_G0002519	antisense lncRNA gene	Chr1:35049024-35053090 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0002473	antisense lncRNA gene	Chr1:36473453-36477473 (+)
WSB/EiJ	MGP_WSBEiJ_G0002591	antisense lncRNA gene	Chr1:36495095-36499109 (+)

Homology

• Gene Tree
  Gm16151
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm16151
• Find Mice (IMSR)
  0 strains or lines available

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000085280 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000085280	Ensembl Gene Model | MGI Sequence Detail	4029	C57BL/6J
transcript	ENSMUST00000129696	Ensembl | MGI Sequence Detail	639	Not Applicable

References

• Summaries
  All 6

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;