Gm16204 Pseudogene Detail

Summary

• Symbol
  Gm16204
• Name
  predicted gene 16204

• Feature Type
  pseudogene
• IDs
  MGI:3801788
  NCBI Gene: 100417841
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr8:38545478-38546317 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 8, 23.76 cM

Strain
Comparison

• SNPs within 2kb
  54 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3801788	pseudogene	Chr8:38543868-38546793 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0014068	pseudogene	Chr8:36831765-36834576 (+)
A/J	MGP_AJ_G0014086	pseudogene	Chr8:35415601-35418403 (+)
AKR/J	MGP_AKRJ_G0014015	pseudogene	Chr8:36496405-36499207 (+)
BALB/cJ	MGP_BALBcJ_G0014039	pseudogene	Chr8:35529660-35532483 (+)
C3H/HeJ	MGP_C3HHeJ_G0013870	pseudogene	Chr8:36888360-36891165 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0014477	pseudogene	Chr8:38208998-38211955 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0012313	pseudogene	Chr8:32222576-32225234 (+)
CAST/EiJ	MGP_CASTEiJ_G0013526	pseudogene	Chr8:36324090-36327743 (+)
CBA/J	MGP_CBAJ_G0013852	pseudogene	Chr8:39752956-39755761 (+)
DBA/2J	MGP_DBA2J_G0013931	pseudogene	Chr8:35328836-35331638 (+)
FVB/NJ	MGP_FVBNJ_G0013933	pseudogene	Chr8:34928877-34932120 (+)
LP/J	MGP_LPJ_G0014017	pseudogene	Chr8:36845703-36849549 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0013959	pseudogene	Chr8:39267863-39271063 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0014450	pseudogene	Chr8:36628799-36631604 (+)
PWK/PhJ	MGP_PWKPhJ_G0013339	pseudogene	Chr8:34855560-34858455 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0013118	pseudogene	Chr8:35898977-35901279 (+)
WSB/EiJ	MGP_WSBEiJ_G0013588	pseudogene	Chr8:36830520-36833423 (+)

Homology

• Gene Tree
  Gm16204
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000081517 (Evidence)
• NCBI Gene
  100417841

Representative Sequences			Length	Strain/Species
genomic	100417841	NCBI Gene Model | MGI Sequence Detail	840	C57BL/6J

References

• Summaries
  All 5
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;