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Gm16196 Gene Detail
Summary
  • Symbol
    Gm16196
  • Name
    predicted gene 16196
  • Feature Type
    lncRNA gene
  • IDs
    MGI:3801772
    NCBI Gene: 105246247
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr17:29233616-29251542 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 17, 15.03 cM
Strain
Comparison
more
  • SNPs within 2kb
    47 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3801772
 lncRNA gene Chr17:29233224-29251567 (-)
129S1/SvImJ MGP_129S1SvImJ_G0005711
 lincRNA gene Chr17:28507270-28509826 (-)
A/J MGP_AJ_G0005700
 lincRNA gene Chr17:27527816-27529060 (-)
AKR/J MGP_AKRJ_G0005679
 lincRNA gene Chr17:27756767-27758024 (-)
BALB/cJ MGP_BALBcJ_G0005680
 lincRNA gene Chr17:27807119-27808332 (-)
C3H/HeJ MGP_C3HHeJ_G0005627
 lincRNA gene Chr17:28142473-28143719 (-)
C57BL/6NJ MGP_C57BL6NJ_G0005838
 lincRNA gene Chr17:29634472-29638242 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0005191
 lincRNA gene Chr17:24873707-24875819 (-)
CAST/EiJ MGP_CASTEiJ_G0005569
 lincRNA gene Chr17:28118722-28120009 (-)
CBA/J MGP_CBAJ_G0005615
 lincRNA gene Chr17:30726988-30728741 (-)
DBA/2J MGP_DBA2J_G0005633
 lincRNA gene Chr17:27069765-27071386 (-)
FVB/NJ MGP_FVBNJ_G0005659
 lincRNA gene Chr17:26897175-26899538 (-)
LP/J MGP_LPJ_G0005714
 lincRNA gene Chr17:28761586-28765151 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0005644
 lincRNA gene Chr17:30096542-30100506 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0005838
 lincRNA gene Chr17:28208228-28211257 (-)
PWK/PhJ MGP_PWKPhJ_G0005515
 lincRNA gene Chr17:25900657-25902140 (-)
SPRET/EiJ MGP_SPRETEiJ_G0005434
 lincRNA gene Chr17:26209764-26210998 (-)
WSB/EiJ MGP_WSBEiJ_G0005621
 lincRNA gene Chr17:28179307-28181273 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    707
  • Tissues
    1
  • Literature Summary
    1
Sequences &
Gene Models
less
  • All Sequences
    26
  • RefSeq
    3
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000086154 Ensembl Gene Model | MGI Sequence Detail 17927 C57BL/6J ±  kb
transcript ENSMUST00000233751 Ensembl | MGI Sequence Detail 1708 Not Applicable  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 1
    Primer pair 1
References
more
  • Summaries
    All 9
    Developmental Gene Expression 1
    Phenotypes 3
  • Earliest
    J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14
  • Latest
    J:287849 Wang YM, et al., MicroRNA-197 controls ADAM10 expression to mediate MeCP2's role in the differentiation of neuronal progenitors. Cell Death Differ. 2019 Oct;26(10):1863-1879
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory