Gm15918 Gene Detail

Summary

• Symbol
  Gm15918
• Name
  predicted gene 15918

• Feature Type
  lncRNA gene
• IDs
  MGI:3801738
  NCBI Gene: 105245780
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr14:63839973-63844821 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 14, 33.34 cM

Strain
Comparison

• SNPs within 2kb
  9 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3801738	lncRNA gene	Chr14:63838228-63845168 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0003258	antisense lncRNA gene	Chr14:58143414-58148252 (-)
A/J	MGP_AJ_G0003234	antisense lncRNA gene	Chr14:56815008-56819901 (-)
AKR/J	MGP_AKRJ_G0003217	antisense lncRNA gene	Chr14:58835182-58840019 (-)
BALB/cJ	MGP_BALBcJ_G0003223	antisense lncRNA gene	Chr14:56771708-56776494 (-)
C3H/HeJ	MGP_C3HHeJ_G0003176	antisense lncRNA gene	Chr14:58456727-58461565 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0003365	antisense lncRNA gene	Chr14:60889983-60894819 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0002889	antisense lncRNA gene	Chr14:54754901-54759987 (-)
CAST/EiJ	MGP_CASTEiJ_G0003142	antisense lncRNA gene	Chr14:54914087-54918904 (-)
CBA/J	MGP_CBAJ_G0003173	antisense lncRNA gene	Chr14:62712436-62717282 (-)
DBA/2J	MGP_DBA2J_G0003178	antisense lncRNA gene	Chr14:56489029-56493867 (-)
FVB/NJ	MGP_FVBNJ_G0003197	antisense lncRNA gene	Chr14:55874081-55879220 (-)
LP/J	MGP_LPJ_G0003255	antisense lncRNA gene	Chr14:59182635-59187473 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0003186	antisense lncRNA gene	Chr14:61929894-61935581 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0003367	antisense lncRNA gene	Chr14:57989135-57993982 (-)
PWK/PhJ	MGP_PWKPhJ_G0003100	antisense lncRNA gene	Chr14:53169952-53175510 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0003046	antisense lncRNA gene	Chr14:53953973-53958589 (-)
WSB/EiJ	MGP_WSBEiJ_G0003176	antisense lncRNA gene	Chr14:58307821-58312653 (-)

Homology

• Gene Tree
  Gm15918
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm15918
• Find Mice (IMSR)
  0 strains or lines available

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  706
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  24
• RefSeq
  2

• Ensembl
  ENSMUSG00000087652 (Evidence)
• NCBI Gene
  105245780

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000087652	Ensembl Gene Model | MGI Sequence Detail	4849	C57BL/6J
transcript	ENSMUST00000137259	Ensembl | MGI Sequence Detail	689	Not Applicable

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 9

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;