1700049E17Rik2 Gene Detail

Summary

• Symbol
  1700049E17Rik2
• Name
  tandem duplication of RIKEN cDNA 1700049E17 gene, gene 2
• Synonyms
  100041722

• Feature Type
  protein coding gene
• IDs
  MGI:3796510
  NCBI Gene: 100041722
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr14:41295168-41303262 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 14, 22.38 cM
• Mapping Data
  1 experiment

Strain
Comparison

• Strain Annotations
  1

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3796510	protein coding gene	Chr14:41257382-41303262 (+)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• MGI Vertebrate Homology
  1700049E17Rik2 stringent orthology
  1 mouse;4 rat
  
• Gene Tree
  1700049E17Rik2
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  1 phenotype reference
  

• All Mutations and Alleles
  1
• Targeted
  1
• Find Mice (IMSR)
  1 strains or lines available

Expression

• Assay Results
  706
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  19
• RefSeq
  11
• CCDS
  CCDS88632.1

• Ensembl
  ENSMUSG00000090440 (Evidence)
• NCBI Gene
  100041722

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000090440	Ensembl Gene Model | MGI Sequence Detail	8095	C57BL/6J
transcript	ENSMUST00000163912	Ensembl | MGI Sequence Detail	1757	Not Applicable
polypeptide	ENSMUSP00000130091	Ensembl | MGI Sequence Detail	198	Not Applicable

Molecular
Reagents

• All nucleic 1

  cDNA 1

Other
Accession IDs

MGI:3781660

References

• Summaries
  All 6

  Phenotypes 1
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:157064 University of California, Davis, Alleles produced for the KOMP project by the University of California, Davis. MGI Direct Data Submission. 2010;