Gm15712 Pseudogene Detail

Summary

• Symbol
  Gm15712
• Name
  predicted gene 15712

• Feature Type
  pseudogene
• IDs
  MGI:3783154
  NCBI Gene: 100416291
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr16:43004942-43006091 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 16, 28.44 cM

Strain
Comparison

• SNPs within 2kb
  11 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3783154	pseudogene	Chr16:43004936-43006091 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0011281	pseudogene	Chr16:41877658-41878813 (+)
A/J	MGP_AJ_G0011268	pseudogene	Chr16:39968831-39969986 (+)
AKR/J	MGP_AKRJ_G0011229	pseudogene	Chr16:41289392-41290547 (+)
BALB/cJ	MGP_BALBcJ_G0011237	pseudogene	Chr16:39969402-39970557 (+)
C3H/HeJ	MGP_C3HHeJ_G0011134	pseudogene	Chr16:41468110-41469265 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0011528	pseudogene	Chr16:42856392-42857547 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0010116	pseudogene	Chr16:40057478-40058633 (+)
CAST/EiJ	MGP_CASTEiJ_G0010960	pseudogene	Chr16:41671319-41672474 (+)
CBA/J	MGP_CBAJ_G0011113	pseudogene	Chr16:44686255-44687410 (+)
DBA/2J	MGP_DBA2J_G0011161	pseudogene	Chr16:39713404-39714559 (+)
FVB/NJ	MGP_FVBNJ_G0011162	pseudogene	Chr16:39701201-39702356 (+)
LP/J	MGP_LPJ_G0011256	pseudogene	Chr16:41585666-41586821 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0011155	pseudogene	Chr16:44044247-44045402 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0011510	pseudogene	Chr16:41284258-41285413 (+)
PWK/PhJ	MGP_PWKPhJ_G0010831	pseudogene	Chr16:40110007-40111162 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0010659	pseudogene	Chr16:41201148-41202303 (+)
WSB/EiJ	MGP_WSBEiJ_G0011002	pseudogene	Chr16:41401401-41402557 (+)

Homology

• Gene Tree
  Gm15712
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000083827 (Evidence)
• NCBI Gene
  100416291

Representative Sequences			Length	Strain/Species
genomic	100416291	NCBI Gene Model | MGI Sequence Detail	1150	C57BL/6J

References

• Summaries
  All 5
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;