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Sox5os4 Gene Detail
Summary
  • Symbol
    Sox5os4
  • Name
    SRY (sex determining region Y)-box 5, opposite strand 4
  • Synonyms
    Gm15686
Location &
Maps
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  • Sequence Map
    Chr6:144705027-144705797 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 6, 77.03 cM
Strain
Comparison
more
  • SNPs within 2kb
    23 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3783128
antisense lncRNA gene Chr6:144666637-144705797 (+)
129S1/SvImJ MGP_129S1SvImJ_G0004389
antisense lncRNA gene Chr6:149670146-149710010 (+)
A/J MGP_AJ_G0004366
antisense lncRNA gene Chr6:143758604-143797399 (+)
AKR/J MGP_AKRJ_G0004348
antisense lncRNA gene Chr6:148046912-148085770 (+)
BALB/cJ MGP_BALBcJ_G0004352
antisense lncRNA gene Chr6:143519473-143558823 (+)
C3H/HeJ MGP_C3HHeJ_G0004301
antisense lncRNA gene Chr6:148065018-148104862 (+)
C57BL/6NJ MGP_C57BL6NJ_G0004502
antisense lncRNA gene Chr6:153707865-153749486 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0003962
antisense lncRNA gene Chr6:142514278-142554316 (+)
CAST/EiJ MGP_CASTEiJ_G0004261
antisense lncRNA gene Chr6:147678684-147719628 (+)
CBA/J MGP_CBAJ_G0004295
antisense lncRNA gene Chr6:159563136-159607608 (+)
DBA/2J MGP_DBA2J_G0004310
antisense lncRNA gene Chr6:142558922-142598636 (+)
FVB/NJ MGP_FVBNJ_G0004327
antisense lncRNA gene Chr6:141300847-141339643 (+)
LP/J MGP_LPJ_G0004389
antisense lncRNA gene Chr6:149766498-149808638 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0004318
antisense lncRNA gene Chr6:163383162-163423279 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0004499
antisense lncRNA gene Chr6:147875685-147917131 (+)
PWK/PhJ MGP_PWKPhJ_G0004214
antisense lncRNA gene Chr6:141061292-141100618 (+)
SPRET/EiJ MGP_SPRETEiJ_G0004156
antisense lncRNA gene Chr6:146024275-146067667 (+)
WSB/EiJ MGP_WSBEiJ_G0004300
antisense lncRNA gene Chr6:148460196-148501274 (+)



Homology
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Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
Sequences &
Gene Models
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  • All Sequences
  • RefSeq
Representative SequencesLengthStrain/SpeciesFlank
genomic 102633928 NCBI Gene Model | MGI Sequence Detail 771 C57BL/6J ±  kb
transcript XR_378133 RefSeq | MGI Sequence Detail 664 C57BL/6J  
For the selected sequence
References
more
  • Summaries
    All 6
  • Earliest
    J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
  • Latest
    J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
11/22/2022
MGI 6.22
The Jackson Laboratory