Gm15635 Gene Detail

Summary

• Symbol
  Gm15635
• Name
  predicted gene 15635

• Feature Type
  lncRNA gene
• IDs
  MGI:3783079
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr7:99309337-99316707 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, 54.11 cM

Strain
Comparison

• SNPs within 2kb
  100 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3783079	lncRNA gene	Chr7:99309337-99316707 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0004487	antisense lncRNA gene	Chr7:102477618-102483559 (+)
A/J	MGP_AJ_G0004467	antisense lncRNA gene	Chr7:99919973-99925920 (+)
AKR/J	MGP_AKRJ_G0004450	antisense lncRNA gene	Chr7:102299039-102304992 (+)
BALB/cJ	MGP_BALBcJ_G0004452	antisense lncRNA gene	Chr7:99599881-99605828 (+)
C3H/HeJ	MGP_C3HHeJ_G0004401	antisense lncRNA gene	Chr7:102656772-102662709 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0004603	antisense lncRNA gene	Chr7:106387514-106394937 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0004057	antisense lncRNA gene	Chr7:102343826-102349210 (+)
CAST/EiJ	MGP_CASTEiJ_G0004361	antisense lncRNA gene	Chr7:94190283-94196177 (+)
CBA/J	MGP_CBAJ_G0004396	antisense lncRNA gene	Chr7:110049594-110055529 (+)
DBA/2J	MGP_DBA2J_G0004410	antisense lncRNA gene	Chr7:98254342-98260277 (+)
FVB/NJ	MGP_FVBNJ_G0004427	antisense lncRNA gene	Chr7:98045960-98052306 (+)
LP/J	MGP_LPJ_G0004491	antisense lncRNA gene	Chr7:103792660-103798652 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0004417	antisense lncRNA gene	Chr7:111486074-111492069 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0004601	antisense lncRNA gene	Chr7:101571745-101577695 (+)
PWK/PhJ	MGP_PWKPhJ_G0004314	antisense lncRNA gene	Chr7:91351511-91357443 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0004255	antisense lncRNA gene	Chr7:88872898-88878806 (+)
WSB/EiJ	MGP_WSBEiJ_G0004400	antisense lncRNA gene	Chr7:102244257-102251673 (+)

Homology

• Gene Tree
  Gm15635
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  9 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Gm15635
• Find Mice (IMSR)
  0 strains or lines available

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23

• Ensembl
  ENSMUSG00000085095 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000085095	Ensembl Gene Model | MGI Sequence Detail	7371	C57BL/6J
transcript	ENSMUST00000208024	Ensembl | MGI Sequence Detail	2539	Not Applicable

References

• Summaries
  All 13

  Phenotypes 9
• Earliest
  J:88307 Giometti CS, et al., The analysis of recessive lethal mutations in mice by using two-dimensional gel electrophoresis of liver proteins. Mutat Res. 1990 Sep;242(1):47-55
• Latest
  J:123187 Cohen-Barak O, et al., Stem cell transplantation demonstrates that Sox6 represses epsilon y globin expression in definitive erythropoiesis of adult mice. Exp Hematol. 2007 Mar;35(3):358-67