Gm15629 Gene Detail

Summary

• Symbol
  Gm15629
• Name
  predicted gene 15629

• Feature Type
  lncRNA gene
• IDs
  MGI:3783073
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr14:75434513-75436711 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 14, 39.69 cM

Strain
Comparison

• SNPs within 2kb
  74 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3783073	lncRNA gene	Chr14:75434513-75436711 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0003268	antisense lncRNA gene	Chr14:70011067-70013813 (-)
A/J	MGP_AJ_G0003244	antisense lncRNA gene	Chr14:68449502-68451700 (-)
AKR/J	MGP_AKRJ_G0003227	antisense lncRNA gene	Chr14:70479845-70482043 (-)
BALB/cJ	MGP_BALBcJ_G0003233	antisense lncRNA gene	Chr14:68250843-68253041 (-)
C3H/HeJ	MGP_C3HHeJ_G0003186	antisense lncRNA gene	Chr14:70208489-70210687 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0003375	antisense lncRNA gene	Chr14:73082361-73084559 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0002899	antisense lncRNA gene	Chr14:66091901-66094116 (-)
CAST/EiJ	MGP_CASTEiJ_G0003152	antisense lncRNA gene	Chr14:66875823-66878712 (-)
CBA/J	MGP_CBAJ_G0003183	antisense lncRNA gene	Chr14:75418516-75420714 (-)
DBA/2J	MGP_DBA2J_G0003188	antisense lncRNA gene	Chr14:67857746-67859944 (-)
FVB/NJ	MGP_FVBNJ_G0003207	antisense lncRNA gene	Chr14:67186599-67189022 (-)
LP/J	MGP_LPJ_G0003261	antisense lncRNA gene	Chr14:71170732-71172992 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0003196	antisense lncRNA gene	Chr14:74204224-74207475 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0003377	antisense lncRNA gene	Chr14:69773903-69776104 (-)
PWK/PhJ	MGP_PWKPhJ_G0003110	antisense lncRNA gene	Chr14:64591742-64593976 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0003056	antisense lncRNA gene	Chr14:65719912-65722113 (-)
WSB/EiJ	MGP_WSBEiJ_G0003186	antisense lncRNA gene	Chr14:70104525-70106744 (-)

Homology

• Gene Tree
  Gm15629
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm15629
• Find Mice (IMSR)
  0 strains or lines available

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000090054 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000090054	Ensembl Gene Model | MGI Sequence Detail	2199	C57BL/6J
transcript	ENSMUST00000161819	Ensembl | MGI Sequence Detail	476	Not Applicable

References

• Summaries
  All 6

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;