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Gm15609 Gene Detail
Summary
  • Symbol
    Gm15609
  • Name
    predicted gene 15609
  • Feature Type
    lncRNA gene
  • IDs
    MGI:3783055
    NCBI Gene: 105246018
  • Alliance
    gene page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr15:89404299-89407880 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 15, 44.96 cM
Strain
Comparison
more
  • SNPs within 2kb
    15 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3783055
 lncRNA gene Chr15:89391600-89407953 (-)
129S1/SvImJ MGP_129S1SvImJ_G0015308
 unclassified non-coding RNA gene Chr15:90727903-90731484 (-)
A/J MGP_AJ_G0015283
 unclassified non-coding RNA gene Chr15:87254779-87258360 (-)
AKR/J MGP_AKRJ_G0015246
 unclassified non-coding RNA gene Chr15:89838999-89842580 (-)
BALB/cJ MGP_BALBcJ_G0015246
 unclassified non-coding RNA gene Chr15:87356475-87360053 (-)
C3H/HeJ MGP_C3HHeJ_G0015070
 unclassified non-coding RNA gene Chr15:89838306-89841887 (-)
C57BL/6NJ MGP_C57BL6NJ_G0015700
 unclassified non-coding RNA gene Chr15:94024292-94027873 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0013442
 unclassified non-coding RNA gene Chr15:83473045-83476631 (-)
CAST/EiJ MGP_CASTEiJ_G0014621
 unclassified non-coding RNA gene Chr15:90620815-90624396 (-)
CBA/J MGP_CBAJ_G0015049
 unclassified non-coding RNA gene Chr15:97217101-97220682 (-)
DBA/2J MGP_DBA2J_G0015144
 unclassified non-coding RNA gene Chr15:86701774-86705355 (-)
FVB/NJ MGP_FVBNJ_G0015151
 unclassified non-coding RNA gene Chr15:85775037-85778618 (-)
LP/J MGP_LPJ_G0015223
 unclassified non-coding RNA gene Chr15:90882767-90886348 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0015176
 unclassified non-coding RNA gene Chr15:101601162-101604743 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0015739
 unclassified non-coding RNA gene Chr15:89876694-89880275 (-)
PWK/PhJ MGP_PWKPhJ_G0014412
 unclassified non-coding RNA gene Chr15:86766031-86769608 (-)
SPRET/EiJ MGP_SPRETEiJ_G0014199
 unclassified non-coding RNA gene Chr15:89629385-89635351 (-)
WSB/EiJ MGP_WSBEiJ_G0014728
 unclassified non-coding RNA gene Chr15:90380067-90383648 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    17 phenotype references
  • All Mutations and Alleles
    2
  • Chemically induced (other)
    1
  • Radiation induced
    1
  • Genomic Mutations
    2 involving Gm15609
  • Find Mice (IMSR)
    1 strains or lines available
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    1
Sequences &
Gene Models
less
  • All Sequences
    25
  • RefSeq
    3
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000086602 Ensembl Gene Model | MGI Sequence Detail 3582 C57BL/6J ±  kb
transcript ENSMUST00000155610 Ensembl | MGI Sequence Detail 2960 Not Applicable  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 1
    cDNA 1
References
more
  • Summaries
    All 24
    Phenotypes 17
  • Earliest
    J:7688 Lane PW, et al., Association of megacolon with a new dominant spotting gene (Dom) in the mouse. J Hered. 1984 Nov-Dec;75(6):435-9
  • Latest
    J:285676 Suzuki A, et al., Genes and microRNAs associated with mouse cleft palate: A systematic review and bioinformatics analysis. Mech Dev. 2018 Apr;150:21-27
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/09/2024
MGI 6.23 		The Jackson Laboratory