Gm15517 Gene Detail

Summary

• Symbol
  Gm15517
• Name
  predicted gene 15517

• Feature Type
  protein coding gene
• IDs
  MGI:3782964
  NCBI Gene: 628854
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr7:43910871-43911315 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, 28.78 cM

Strain
Comparison

• SNPs within 2kb
  41 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3782964	protein coding gene	Chr7:43910865-43911315 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0015664	unclassified non-coding RNA gene	Chr7:44409190-44409634 (+)
A/J	MGP_AJ_G0015643	unclassified non-coding RNA gene	Chr7:43612553-43612997 (+)
AKR/J	MGP_AKRJ_G0015606	unclassified non-coding RNA gene	Chr7:44805697-44806141 (+)
BALB/cJ	MGP_BALBcJ_G0015604	unclassified non-coding RNA gene	Chr7:43612021-43612465 (+)
C3H/HeJ	MGP_C3HHeJ_G0015426	unclassified non-coding RNA gene	Chr7:45297324-45297768 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0016058	unclassified non-coding RNA gene	Chr7:46659274-46659718 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0013788	unclassified non-coding RNA gene	Chr7:45524019-45524463 (+)
CAST/EiJ	MGP_CASTEiJ_G0014981	unclassified non-coding RNA gene	Chr7:36652119-36652563 (+)
CBA/J	MGP_CBAJ_G0015407	unclassified non-coding RNA gene	Chr7:48166871-48167315 (+)
DBA/2J	MGP_DBA2J_G0015502	unclassified non-coding RNA gene	Chr7:43284944-43285388 (+)
FVB/NJ	MGP_FVBNJ_G0015509	unclassified non-coding RNA gene	Chr7:43013345-43013789 (+)
LP/J	MGP_LPJ_G0015582	unclassified non-coding RNA gene	Chr7:45092321-45092765 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0015531	unclassified non-coding RNA gene	Chr7:46944188-46944632 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0016100	unclassified non-coding RNA gene	Chr7:44019137-44019581 (+)
PWK/PhJ	MGP_PWKPhJ_G0014763	unclassified non-coding RNA gene	Chr7:36620608-36621052 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0014552	unclassified non-coding RNA gene	Chr7:32030584-32031022 (+)
WSB/EiJ	MGP_WSBEiJ_G0015086	unclassified non-coding RNA gene	Chr7:44485624-44486068 (+)

Homology

• Gene Tree
  Gm15517
  

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  706
• cDNA Data
  4

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  28
• RefSeq
  2
• UniProt
  1

• Ensembl
  ENSMUSG00000087376 (Evidence)
• NCBI Gene
  628854

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000087376	Ensembl Gene Model | MGI Sequence Detail	445	C57BL/6J
transcript	ENSMUST00000124863	Ensembl | MGI Sequence Detail	251	Not Applicable
polypeptide	ENSMUSP00000147626	Ensembl | MGI Sequence Detail	28	Not Applicable

Protein
Information

• UniProt
  1 Sequence

Molecular
Reagents

• All nucleic 4

  cDNA 4

References

• Summaries
  All 9
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:57747 MGI Genome Annotation Group and UniGene Staff, MGI-UniGene Interconnection Effort. Database Download. 2015;

TSS for Gm15517:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr66124	Chr7:43910848-43910926 (+)	16 bp