Gm15499 Gene Detail

Summary

• Symbol
  Gm15499
• Name
  predicted gene 15499

• Feature Type
  lncRNA gene
• IDs
  MGI:3782946
  NCBI Gene: 102635225
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr6:145387482-145389754 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, 77.42 cM

Strain
Comparison

• SNPs within 2kb
  87 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3782946	lncRNA gene	Chr6:145387482-145401031 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0004394	antisense lncRNA gene	Chr6:150441415-150443660 (+)
A/J	MGP_AJ_G0004371	antisense lncRNA gene	Chr6:144495481-144497777 (+)
AKR/J	MGP_AKRJ_G0004353	antisense lncRNA gene	Chr6:148777746-148782544 (+)
BALB/cJ	MGP_BALBcJ_G0004357	antisense lncRNA gene	Chr6:144249855-144252100 (+)
C3H/HeJ	MGP_C3HHeJ_G0004306	antisense lncRNA gene	Chr6:148814756-148817883 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0004507	antisense lncRNA gene	Chr6:154481430-154483684 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0003966	antisense lncRNA gene	Chr6:143239683-143241937 (+)
CAST/EiJ	MGP_CASTEiJ_G0004266	antisense lncRNA gene	Chr6:148460061-148462316 (+)
CBA/J	MGP_CBAJ_G0004300	antisense lncRNA gene	Chr6:160359424-160361664 (+)
DBA/2J	MGP_DBA2J_G0004315	antisense lncRNA gene	Chr6:143276597-143279379 (+)
FVB/NJ	MGP_FVBNJ_G0004332	antisense lncRNA gene	Chr6:142020971-142023161 (+)
LP/J	MGP_LPJ_G0004394	antisense lncRNA gene	Chr6:150550547-150552802 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0004323	antisense lncRNA gene	Chr6:164144241-164147127 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0004504	antisense lncRNA gene	Chr6:148614451-148617263 (+)
PWK/PhJ	MGP_PWKPhJ_G0004219	antisense lncRNA gene	Chr6:141787340-141789535 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0004161	antisense lncRNA gene	Chr6:146782644-146784923 (+)
WSB/EiJ	MGP_WSBEiJ_G0004305	antisense lncRNA gene	Chr6:149217514-149219724 (+)

Homology

• Gene Tree
  Gm15499
  

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000086722 (Evidence)
• NCBI Gene
  102635225

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000086722	Ensembl Gene Model | MGI Sequence Detail	2273	C57BL/6J
transcript	ENSMUST00000141390	Ensembl | MGI Sequence Detail	422	Not Applicable

References

• Summaries
  All 6
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;