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Pdcd5-ps Pseudogene Detail
Summary
  • Symbol
    Pdcd5-ps
  • Name
    programmed cell death 5, pseudogene
  • Synonyms
    Gm37810, Gm3837
Location &
Maps
more
  • Sequence Map
    Chr1:189277443-189277823 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 1, 94.42 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    22 from dbSNP Build 142
  • Strain Annotations
    12
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3782009
pseudogene Chr1:189277306-189280405 (-)
129S1/SvImJ MGP_129S1SvImJ_G0010472
pseudogene Chr1:196176693-196177073 (-)
A/J MGP_AJ_G0010461
pseudogene Chr1:188160910-188161290 (-)
AKR/J MGP_AKRJ_G0010427
pseudogene Chr1:193683160-193683540 (-)
BALB/cJ no annotation
C3H/HeJ MGP_C3HHeJ_G0010366
pseudogene Chr1:194557422-194557802 (-)
C57BL/6NJ MGP_C57BL6NJ_G0010707
pseudogene Chr1:202456292-202456672 (-)
CAROLI/EiJ no annotation
CAST/EiJ no annotation
CBA/J MGP_CBAJ_G0010905
pseudogene Chr13:113804589-113804969 (+)
DBA/2J MGP_DBA2J_G0010364
pseudogene Chr1:186897870-186898250 (-)
FVB/NJ no annotation
LP/J MGP_LPJ_G0010453
pseudogene Chr1:197351884-197352264 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0010352
pseudogene Chr1:216717477-216717857 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0011295
pseudogene Chr13:104804674-104805054 (+)
PWK/PhJ no annotation
SPRET/EiJ no annotation
WSB/EiJ MGP_WSBEiJ_G0010256
pseudogene Chr1:193811964-193812344 (-)



Homology
more
  • Human Ortholog
    PDCD5, programmed cell death 5
  • Vertebrate Orthologs
    12
  • Human Ortholog
    PDCD5, programmed cell death 5
    Orthology source: HomoloGene
  • Synonyms
    TFAR19
  • Links
    NCBI Gene ID: 9141
    neXtProt AC: NX_O14737
    UniProt: O14737

  • Chr Location
    19q13.11; chr19:32581161-32587452 (+)  GRCh38.p7

Expression
less
Sequences &
Gene Models
less
  • All Sequences
  • RefSeq
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000102824 Ensembl Gene Model | MGI Sequence Detail 381 C57BL/6J ±  kb
transcript ENSMUST00000191699 Ensembl | MGI Sequence Detail 381 Not Applicable  
For the selected sequence
Other
Accession IDs
less
MGI:5611038
References
more
  • Summaries
    All 6
  • Earliest
    J:23000 MGD Nomenclature Committee, 2/14/1995;
  • Latest
    J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/13/2018
MGI 6.13
The Jackson Laboratory