Gm3571 Pseudogene Detail

Summary

• Symbol
  Gm3571
• Name
  predicted gene 3571

• Feature Type
  pseudogene
• IDs
  MGI:3781748
  NCBI Gene: 100041907
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr10:93614522-93615581 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, 48.65 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  52 from dbSNP Build 142
• Strain Annotations
  14

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3781748	pseudogene	Chr10:93614473-93615635 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0036458	pseudogene	Chr6:3644440-3645617 (-)
A/J	MGP_AJ_G0036443	pseudogene	Chr6:3504852-3506029 (-)
AKR/J	MGP_AKRJ_G0036394	pseudogene	Chr6:3602132-3603282 (-)
BALB/cJ	MGP_BALBcJ_G0036435	pseudogene	Chr6:3456840-3458017 (-)
C3H/HeJ	MGP_C3HHeJ_G0036126	pseudogene	Chr6:3550062-3551239 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0036947	pseudogene	Chr6:3732839-3734017 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	MGP_CBAJ_G0036098	pseudogene	Chr6:3887869-3889046 (-)
DBA/2J	MGP_DBA2J_G0036274	pseudogene	Chr6:3447468-3448646 (-)
FVB/NJ	MGP_FVBNJ_G0036229	pseudogene	Chr6:3432301-3433478 (-)
LP/J	MGP_LPJ_G0036326	pseudogene	Chr6:3592376-3593554 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0036230	pseudogene	Chr6:3904706-3905884 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0037056	pseudogene	Chr6:3549607-3550785 (-)
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	MGP_WSBEiJ_G0035515	pseudogene	Chr6:3537564-3538741 (-)

Homology

• Gene Tree
  Gm3571
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  6 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Transposon induced
  1
• Genomic Mutations
  2 involving Gm3571
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  18
• RefSeq
  1

• Ensembl
  ENSMUSG00000090610 (Evidence)
• NCBI Gene
  100041907

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000090610	Ensembl Gene Model | MGI Sequence Detail	1060	C57BL/6J
transcript	ENSMUST00000170703	Ensembl | MGI Sequence Detail	1060	Not Applicable

References

• Summaries
  All 10

  Phenotypes 6
• Earliest
  J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
• Latest
  J:74548 Benson KF, et al., Molecular Characterization of the Mouse In(10)17Rk Inversion and Identification of a Novel Muscle-Specific Gene at the Proximal Breakpoint. Genetics. 2002 Jan;160(1):279-87

TSS for Gm3571:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr95284	Chr10:93614465-93614491 (+)	-44 bp