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Gm3550 Gene Detail
Summary
  • Symbol
    Gm3550
  • Name
    predicted gene 3550
Location &
Maps
more
  • Sequence Map
    Chr18:34737368-34738014 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 18, 18.71 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    20 from dbSNP Build 142
  • Strain Annotations
    10
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3781727
protein coding gene Chr18:34736359-34738014 (+)
129S1/SvImJ MGP_129S1SvImJ_G0024249
protein coding gene Chr18:32970509-32971935 (+)
A/J MGP_AJ_G0024215
protein coding gene Chr18:31850846-31852322 (+)
AKR/J no annotation
BALB/cJ MGP_BALBcJ_G0024215
protein coding gene Chr18:31910512-31911874 (+)
C3H/HeJ no annotation
C57BL/6NJ MGP_C57BL6NJ_G0024657
protein coding gene Chr18:34241103-34242546 (+)
CAROLI/EiJ no annotation
CAST/EiJ no annotation
CBA/J no annotation
DBA/2J no annotation
FVB/NJ MGP_FVBNJ_G0024049
protein coding gene Chr18:31192100-31193447 (+)
LP/J MGP_LPJ_G0024164
protein coding gene Chr18:33051321-33052678 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0024077
protein coding gene Chr18:36429438-36430824 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0024705
protein coding gene Chr18:32584758-32586205 (+)
PWK/PhJ MGP_PWKPhJ_G0023201
protein coding gene Chr18:31709426-31711254 (+)
SPRET/EiJ no annotation
WSB/EiJ no annotation



Homology
less
Mutations,
Alleles, and
Phenotypes
less
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
Interactions
less
Sequences &
Gene Models
less
  • All Sequences
  • RefSeq
  • UniProt
Representative SequencesLengthStrain/SpeciesFlank
genomic 100041859 NCBI Gene Model | MGI Sequence Detail 647 C57BL/6J ±  kb
polypeptide W4VSN7 UniProt | EBI | MGI Sequence Detail 160 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR002673 Ribosomal protein L29e
References
more
  • Summaries
    All 6
    Gene Ontology 1
  • Earliest
    J:265628 Gaudet P, et al., Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief Bioinform. 2011 Sep;12(5):449-62

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
08/04/2020
MGI 6.15
The Jackson Laboratory