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Gm2840 Pseudogene Detail
Summary
  • Symbol
    Gm2840
  • Name
    predicted gene 2840
  • Feature Type
    pseudogene
  • IDs
    MGI:3781012
    NCBI Gene: 100040559
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr5:96173940-96174350 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 5, 47.29 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    17 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3781012
pseudogene Chr5:96173940-96174350 (+)
129S1/SvImJ MGP_129S1SvImJ_G0013184
pseudogene Chr5:97392765-97393175 (+)
A/J MGP_AJ_G0013170
pseudogene Chr5:93836042-93836452 (+)
AKR/J MGP_AKRJ_G0013137
pseudogene Chr5:96962599-96963009 (+)
BALB/cJ MGP_BALBcJ_G0013150
pseudogene Chr5:94818270-94818680 (+)
C3H/HeJ MGP_C3HHeJ_G0012997
pseudogene Chr5:97287343-97287753 (+)
C57BL/6NJ MGP_C57BL6NJ_G0013512
pseudogene Chr5:101554136-101554546 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0011679
pseudogene Chr5:89234689-89235102 (+)
CAST/EiJ MGP_CASTEiJ_G0012728
pseudogene Chr5:95872612-95873025 (+)
CBA/J MGP_CBAJ_G0012969
pseudogene Chr5:105069211-105069621 (+)
DBA/2J MGP_DBA2J_G0013049
pseudogene Chr5:94034412-94034822 (+)
FVB/NJ MGP_FVBNJ_G0013052
pseudogene Chr5:92864346-92864756 (+)
LP/J MGP_LPJ_G0013119
pseudogene Chr5:98064251-98064661 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0013070
pseudogene Chr5:110163441-110163851 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0013515
pseudogene Chr5:96391204-96391614 (+)
PWK/PhJ MGP_PWKPhJ_G0012546
pseudogene Chr5:92441141-92441774 (+)
SPRET/EiJ MGP_SPRETEiJ_G0012342
pseudogene Chr5:94047315-94047725 (+)
WSB/EiJ MGP_WSBEiJ_G0012764
pseudogene Chr5:96707306-96707716 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
  • All Mutations and Alleles
    3
  • Chemically induced (other)
    1
  • Radiation induced
    1
  • Spontaneous
    1
  • Genomic Mutations
    3 involving Gm2840
  • Find Mice (IMSR)
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
Sequences &
Gene Models
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  • All Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000090468 Ensembl Gene Model | MGI Sequence Detail 411 C57BL/6J ±  kb
transcript ENSMUST00000048361 Ensembl | MGI Sequence Detail 411 Not Applicable  
For the selected sequence
References
more
  • Summaries
    All 10
    Phenotypes 6
  • Earliest
    J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
  • Latest
    J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
07/29/2020
MGI 6.15
The Jackson Laboratory