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Vmn1r-ps6 Pseudogene Detail
Summary
  • Symbol
    Vmn1r-ps6
  • Name
    vomeronasal 1 receptor, pseudogene 6
  • Synonyms
    Gm2480
Location &
Maps
more
  • Sequence Map
    Chr6:3107477-3108410 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 6, 1.62 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    2 from dbSNP Build 142
  • Strain Annotations
    8
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3780647
 pseudogene Chr6:3107477-3108486 (-)
129S1/SvImJ MGP_129S1SvImJ_G0039745
 pseudogene Chr7:9414195-9416909 (+)
A/J MGP_AJ_G0039745
 pseudogene Chr7:9250057-9259483 (+)
AKR/J no annotation
BALB/cJ no annotation
C3H/HeJ no annotation
C57BL/6NJ no annotation
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0038493
 pseudogene Chr7:7184163-7188251 (+)
CBA/J no annotation
DBA/2J MGP_DBA2J_G0039541
 pseudogene Chr7:9119175-9125869 (+)
FVB/NJ no annotation
LP/J no annotation
NOD/ShiLtJ no annotation
NZO/HlLtJ MGP_NZOHlLtJ_G0040377
 pseudogene Chr7:9280558-9285648 (+)
PWK/PhJ MGP_PWKPhJ_G0038169
 pseudogene Chr7:7633661-7717823 (+)
SPRET/EiJ no annotation
WSB/EiJ MGP_WSBEiJ_G0038728
 pseudogene Chr7:9306494-9311089 (+)



Homology
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    12
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000107380 Ensembl Gene Model | MGI Sequence Detail 934 C57BL/6J ±  kb
transcript ENSMUST00000201079 Ensembl | MGI Sequence Detail 934 Not Applicable  
For the selected sequence
References
more
  • Summaries
    All 5
  • Earliest
    J:150929 Young J, et al., Extreme variability among mammalian V1R gene families. Genome Biol Evol. 2009;20(1):10-18
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory