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Gm2040 Pseudogene Detail
Summary
  • Symbol
    Gm2040
  • Name
    predicted gene 2040
Location &
Maps
more
  • Sequence Map
    Chr5:75269296-75269584 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 5, 39.55 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    42 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3780209
 pseudogene Chr5:75269292-75269708 (+)
129S1/SvImJ MGP_129S1SvImJ_G0013139
 pseudogene Chr5:75225158-75225446 (+)
A/J MGP_AJ_G0013122
 pseudogene Chr5:72367258-72367546 (+)
AKR/J MGP_AKRJ_G0013088
 pseudogene Chr5:74725225-74725513 (+)
BALB/cJ MGP_BALBcJ_G0013103
 pseudogene Chr5:73079517-73079805 (+)
C3H/HeJ MGP_C3HHeJ_G0012949
 pseudogene Chr5:75112744-75113032 (+)
C57BL/6NJ MGP_C57BL6NJ_G0013463
 pseudogene Chr5:78251276-78251564 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0011643
 pseudogene Chr5:68038023-68038311 (+)
CAST/EiJ MGP_CASTEiJ_G0012684
 pseudogene Chr5:74226481-74226769 (+)
CBA/J MGP_CBAJ_G0012921
 pseudogene Chr5:80844677-80844965 (+)
DBA/2J MGP_DBA2J_G0013000
 pseudogene Chr5:72446466-72446754 (+)
FVB/NJ MGP_FVBNJ_G0013003
 pseudogene Chr5:71598850-71599138 (+)
LP/J MGP_LPJ_G0013074
 pseudogene Chr5:75653361-75653649 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0013021
 pseudogene Chr5:84054256-84054544 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0013465
 pseudogene Chr5:74258080-74258368 (+)
PWK/PhJ MGP_PWKPhJ_G0012504
 pseudogene Chr5:71439293-71439581 (+)
SPRET/EiJ MGP_SPRETEiJ_G0012304
 pseudogene Chr5:73614040-73614328 (+)
WSB/EiJ MGP_WSBEiJ_G0012721
 pseudogene Chr5:74552149-74552437 (+)



Homology
less
Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    333 phenotype references
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    22
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000106900 Ensembl Gene Model | MGI Sequence Detail 289 C57BL/6J ±  kb
transcript ENSMUST00000202979 Ensembl | MGI Sequence Detail 289 Not Applicable  
For the selected sequence
References
more
  • Summaries
    All 337
    Diseases 1
    Phenotypes 333
  • Earliest
    J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
  • Latest
    J:341974 Harper RL, et al., Mast cell activation and degranulation in acute artery injury: A target for post-operative therapy. FASEB J. 2023 Jul;37(7):e23029
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory