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Rpl35rt Gene Detail
Summary
  • Symbol
    Rpl35rt
  • Name
    ribosomal protein L35, retrotransposed
  • Synonyms
    Gm2000
Location &
Maps
more
  • Sequence Map
    Chr1:156193610-156194054 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 1, 67.71 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    22 from dbSNP Build 142
  • Strain Annotations
    15
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3780170
 protein coding gene Chr1:156193610-156194054 (+)
129S1/SvImJ MGP_129S1SvImJ_G0034263
 protein coding gene Chr8:127490676-127491118 (+)
A/J MGP_AJ_G0034243
 protein coding gene Chr8:122233430-122233872 (+)
AKR/J MGP_AKRJ_G0034170
 protein coding gene Chr8:125746757-125747323 (+)
BALB/cJ MGP_BALBcJ_G0034236
 protein coding gene Chr8:122419711-122420153 (+)
C3H/HeJ MGP_C3HHeJ_G0033947
 protein coding gene Chr8:126384664-126385106 (+)
C57BL/6NJ MGP_C57BL6NJ_G0034756
 protein coding gene Chr8:131771458-131771900 (+)
CAROLI/EiJ no annotation
CAST/EiJ no annotation
CBA/J MGP_CBAJ_G0033920
 protein coding gene Chr8:136584204-136584646 (+)
DBA/2J MGP_DBA2J_G0034076
 protein coding gene Chr8:121388781-121389223 (+)
FVB/NJ MGP_FVBNJ_G0034020
 protein coding gene Chr8:120549921-120550363 (+)
LP/J no annotation
NOD/ShiLtJ MGP_NODShiLtJ_G0034067
 protein coding gene Chr8:138723413-138723855 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0034775
 protein coding gene Chr8:125978019-125978461 (+)
PWK/PhJ MGP_PWKPhJ_G0032976
 protein coding gene Chr8:121142812-121143742 (+)
SPRET/EiJ MGP_SPRETEiJ_G0020959
 protein coding gene Chr15:81484689-81485133 (-)
WSB/EiJ MGP_WSBEiJ_G0033391
 protein coding gene Chr8:126706704-126707098 (+)



Homology
more
  • Human Ortholog
    RPL35, ribosomal protein L35
  • Vertebrate Orthologs
    7
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    RPL35, ribosomal protein L35
  • Synonyms
    DBA19, L35, uL29
  • Links
    NCBI Gene ID: 11224
    neXtProt AC: NX_P42766
    UniProt: P42766

  • Chr Location
    9q33.3; chr9:124857880-124861981 (-)  GRCh38
Human Diseases
more
  • Diseases
    1 with human RPL35 associations

Human Disease Mouse Models
      
IDs
Click on a disease name to see all genes associated with that disease.

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    5
  • GO References
    2
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    21
  • RefSeq
    1
  • UniProt
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 100038991 NCBI Gene Model | MGI Sequence Detail 445 C57BL/6J ±  kb
polypeptide Q6ZWV7 UniProt | EBI | MGI Sequence Detail 123 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • PDB
    6SWA, 7CPU, 7CPV, 7LS1, 7LS2
  • InterPro Domains
    IPR001854 Large ribosomal subunit protein uL29
    IPR018254 Large ribosomal subunit protein uL29, conserved site
    IPR045059 Large ribosomal subunit protein uL29, eukaryotes
    IPR036049 Large ribosomal subunit protein uL29 superfamily
References
more
  • Summaries
    All 10
    Gene Ontology 2
    Phenotypes 2
  • Earliest
    J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
  • Latest
    J:164563 Mouse Genome Informatics Scientific Curators, Human to Mouse ISO GO annotation transfer. 2010 Oct;
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory