Gm9670 Pseudogene Detail

Summary

• Symbol
  Gm9670
• Name
  predicted gene 9670

• Feature Type
  pseudogene
• IDs
  MGI:3780078
  NCBI Gene: 676246
• Alliance
  gene page

Location &
Maps

• Sequence Map
  ChrX:102550418-102551195 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, 46.18 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  28 from dbSNP Build 142
• Strain Annotations
  16

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3780078	pseudogene	ChrX:102550418-102551195 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0014685	pseudogene	ChrX:100154228-100155005 (+)
A/J	MGP_AJ_G0014693	pseudogene	ChrX:100088374-100089151 (+)
AKR/J	MGP_AKRJ_G0014618	pseudogene	ChrX:103110910-103111688 (+)
BALB/cJ	MGP_BALBcJ_G0014640	pseudogene	ChrX:98884920-98885697 (+)
C3H/HeJ	MGP_C3HHeJ_G0014470	pseudogene	ChrX:100616630-100617407 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0015126	pseudogene	ChrX:103117970-103118747 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0009498	pseudogene	Chr11:12364657-12365276 (+)
CAST/EiJ	MGP_CASTEiJ_G0014099	pseudogene	ChrX:84893078-84893859 (+)
CBA/J	MGP_CBAJ_G0014462	pseudogene	ChrX:106307252-106308029 (+)
DBA/2J	MGP_DBA2J_G0014546	pseudogene	ChrX:99331843-99332621 (+)
FVB/NJ	no annotation
LP/J	MGP_LPJ_G0014643	pseudogene	ChrX:101174581-101175358 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0014572	pseudogene	ChrX:110963453-110964230 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0015093	pseudogene	ChrX:99841578-99842355 (+)
PWK/PhJ	MGP_PWKPhJ_G0013904	pseudogene	ChrX:82474219-82474999 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0013700	pseudogene	ChrX:85593231-85594012 (+)
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm9670
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  18

• Ensembl
  ENSMUSG00000082383 (Evidence)
• NCBI Gene
  676246

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000082383	Ensembl Gene Model | MGI Sequence Detail	778	C57BL/6J
transcript	ENSMUST00000121201	Ensembl | MGI Sequence Detail	540	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;