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Prps1l3 Gene Detail
Summary
  • Symbol
    Prps1l3
  • Name
    phosphoribosyl pyrophosphate synthetase 1-like 3
  • Synonyms
    Gm5081
  • Feature Type
    protein coding gene
  • IDs
    MGI:3779453
    NCBI Gene: 328099
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr12:57230412-57239882 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 12, 24.70 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    71 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3779453
protein coding gene Chr12:57230412-57242168 (+)
129S1/SvImJ MGP_129S1SvImJ_G0019759
protein coding gene Chr12:56405042-56414496 (+)
A/J MGP_AJ_G0019718
protein coding gene Chr12:54323374-54332843 (+)
AKR/J MGP_AKRJ_G0019693
protein coding gene Chr12:56050716-56060186 (+)
BALB/cJ MGP_BALBcJ_G0019698
protein coding gene Chr12:54686142-54696090 (+)
C3H/HeJ MGP_C3HHeJ_G0019503
protein coding gene Chr12:56113299-56122763 (+)
C57BL/6NJ MGP_C57BL6NJ_G0020150
protein coding gene Chr12:58063347-58072829 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0017770
protein coding gene Chr12:52778438-52787762 (+)
CAST/EiJ MGP_CASTEiJ_G0019055
protein coding gene Chr12:51030501-51043025 (+)
CBA/J MGP_CBAJ_G0019472
protein coding gene Chr12:60116319-60125789 (+)
DBA/2J MGP_DBA2J_G0019588
protein coding gene Chr12:54233724-54243019 (+)
FVB/NJ MGP_FVBNJ_G0019576
protein coding gene Chr12:53531233-53540664 (+)
LP/J MGP_LPJ_G0019660
protein coding gene Chr12:56361989-56372093 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0019614
protein coding gene Chr12:61652741-61664922 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0020184
protein coding gene Chr12:55494612-55504072 (+)
PWK/PhJ MGP_PWKPhJ_G0018822
protein coding gene Chr12:48616908-48626294 (+)
SPRET/EiJ MGP_SPRETEiJ_G0018615
protein coding gene Chr12:49921672-49933219 (+)
WSB/EiJ MGP_WSBEiJ_G0019106
protein coding gene Chr12:56021089-56031442 (+)



Homology
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Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    2 phenotype references
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
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Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000079104 Ensembl Gene Model | MGI Sequence Detail 9471 C57BL/6J ±  kb
transcript ENSMUST00000139049 Ensembl | MGI Sequence Detail 1720 Not Applicable  
polypeptide ENSMUSP00000133736 Ensembl | MGI Sequence Detail 318 Not Applicable  
For the selected sequence
Protein
Information
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  • UniProt
    2 Sequences
  • InterPro Domains
    IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site
    IPR000836 Phosphoribosyltransferase domain
    IPR029057 Phosphoribosyltransferase-like
    IPR005946 Ribose-phosphate pyrophosphokinase
    IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type
    IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain
Molecular
Reagents
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  • All nucleic 9
    cDNA 8
    Primer pair 1

    Microarray probesets 1
References
more
  • Summaries
    All 14
    Developmental Gene Expression 1
    Gene Ontology 1
    Phenotypes 2
  • Earliest
    J:122989 Visel A, et al., GenePaint.org: an atlas of gene expression patterns in the mouse embryo. Nucleic Acids Res. 2004 Jan 1;32(Database issue):D552-6
  • Latest
    J:265628 Gaudet P, et al., Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief Bioinform. 2011 Sep;12(5):449-62

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
06/18/2019
MGI 6.14
The Jackson Laboratory