Nct2 Gene Detail

Summary

• Symbol
  Nct2
• Name
  non-coding in testis 2

• Feature Type
  unclassified non-coding RNA gene
• IDs
  MGI:3775249
  NCBI Gene: 100144396
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr2:92379645-92380484 bp, + strand

  From MGI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2,

Strain
Comparison

• SNPs within 2kb
  11 from dbSNP Build 142
• Strain Annotations
  1

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3775249	unclassified non-coding RNA gene	Chr2:92379645-92380484 (+)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  1 phenotype from 1 allele in 1 genetic background
  1 phenotype reference
  

• All Mutations and Alleles
  1
• Targeted
  1
• Find Mice (IMSR)
  0 strains or lines available

Gene Ontology
(GO)
Classifications

• All GO Annotations
  2
• GO References
  1

Expression

• cDNA Data
  3

Sequences &
Gene Models

• All Sequences
  2

• NCBI Gene
  100144396

Representative Sequences			Length	Strain/Species
transcript	AY940663	GenBank | ENA | DDBJ | MGI Sequence Detail	840	Not Specified

Molecular
Reagents

• All nucleic 3

  cDNA 3

References

• Summaries
  All 5

  Gene Ontology 1

  Phenotypes 1
• Earliest
  J:115433 Cho YS, et al., Meiotic messenger RNA and noncoding RNA targets of the RNA-binding protein Translin (TSN) in mouse testis. Biol Reprod. 2005 Oct;73(4):840-7
• Latest
  J:139921 Xu M, et al., Mice deficient for a small cluster of Piwi-interacting RNAs implicate Piwi-interacting RNAs in transposon control. Biol Reprod. 2008 Jul;79(1):51-7