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Bpifb9a Gene Detail
Summary
  • Symbol
    Bpifb9a
  • Name
    BPI fold containing family B, member 9A
  • Synonyms
    4833413D08Rik, vomeromodulin
  • Feature Type
    protein coding gene
  • IDs
    MGI:3767993
    NCBI Gene: 71425
  • Alliance
Location & Maps
more
  • Sequence Map
    Chr2:154257854-154271245 bp, + strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      13392 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 2, 76.34 cM
  • Mapping Data
    1 experiment
Homology
more
  • Human Ortholog
    BPIFB9P, BPI fold containing family B member 9, pseudogene
  • Vertebrate Orthologs
    2
  • Human Ortholog
    BPIFB9P, BPI fold containing family B member 9, pseudogene
    Orthology source: HGNC
  • Synonyms
    C20orf115, dJ1187J4.2, dJ1187J4.3
  • Links
    NCBI Gene ID: 402016

  • Chr Location
    20q11.21; chr20:33347120-33355044 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000015885 VEGA Gene Model | MGI Sequence Detail 13392 C57BL/6J ±  kb
transcript OTTMUST00000037761 VEGA | MGI Sequence Detail 2065 Not Applicable  
polypeptide OTTMUSP00000016937 VEGA | MGI Sequence Detail 591 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    119 from dbSNP Build 142
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR017942 Lipid-binding serum glycoprotein, N-terminal
    IPR034433 Vomeromodulin
Molecular
Reagents
less
  • All nucleic 67
    cDNA 67

    Microarray probesets 1
References
more
  • Summaries
    All 16
    Gene Ontology 2
  • Earliest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
  • Latest
    J:174122 Bingle CD, et al., Systematic nomenclature for the PLUNC/PSP/BSP30/SMGB proteins as a subfamily of the BPI fold-containing superfamily. Biochem Soc Trans. 2011 Aug 1;39(4):977-83

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
12/05/2017
MGI 6.11
The Jackson Laboratory