Mir871 Gene Detail

Summary

• Symbol
  Mir871
• Name
  microRNA 871
• Synonyms
  Mirn871, mmu-mir-871

• Feature Type
  miRNA gene
• IDs
  MGI:3718561
  NCBI Gene: 100124478
• Member of
  Mirc51 cluster
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  ChrX:65854034-65854110 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, 34.81 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  62 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3718561	miRNA gene	ChrX:65854034-65854110 (-)
129S1/SvImJ	ENSMUSG00200016012	miRNA gene	ChrX:47989612-47989688 (-)
A/J	ENSMUSG00195009726	miRNA gene	ChrX:51610335-51610411 (-)
AKR/J	ENSMUSG00220024723	miRNA gene	ChrX:46984927-46985003 (-)
BALB/cJ	ENSMUSG00180006901	miRNA gene	ChrX:48224962-48225038 (-)
C3H/HeJ	ENSMUSG00175009452	miRNA gene	ChrX:51788874-51788950 (-)
C57BL/6NJ	ENSMUSG00215007693	miRNA gene	ChrX:48234770-48234846 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005020166	miRNA gene	ChrX:49868600-49868676 (-)
CBA/J	ENSMUSG00210018941	miRNA gene	ChrX:48423275-48423351 (-)
DBA/2J	ENSMUSG00185035013	miRNA gene	ChrX:60893906-60893982 (-)
FVB/NJ	ENSMUSG00205009297	miRNA gene	ChrX:48003653-48003729 (-)
JF1/MsJ	ENSUMUG00000047789	miRNA gene	ChrX:81744105-81744181 (-)
LP/J	ENSMUSG00230019179	miRNA gene	ChrX:67456980-67457056 (-)
NOD/ShiLtJ	ENSMUSG00190012931	miRNA gene	ChrX:47771027-47771103 (-)
NZO/HlLtJ	ENSMUSG00225049066	miRNA gene	ChrX:72675144-72675220 (-)
PWK/PhJ	ENSLUMG00010026809	miRNA gene	ChrX:47677835-47677911 (-)
SPRET/EiJ	ENSMSPG00010004754	miRNA gene	ChrX:50541589-50541665 (-)
WSB/EiJ	ENSIUOG00005012408	miRNA gene	ChrX:48746328-48746404 (-)

Homology

• Gene Tree
  Mir871
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  1 phenotype reference
  

• All Mutations and Alleles
  1
• Endonuclease-mediated
  1
• Genomic Mutations
  1 involving Mir871
• Find Mice (IMSR)
  0 strains or lines available

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  1

• Ensembl
  ENSMUSG00000119361 (Evidence)
• NCBI Gene
  100124478

Representative Sequences			Length	Strain/Species
genomic	100124478	NCBI Gene Model | MGI Sequence Detail	77	C57BL/6J
transcript	NR_030536	RefSeq | MGI Sequence Detail	77	C57BL/6

Molecular
Reagents

• All nucleic 1

  Other 1

Other Database
Links

miRBase

MI0005471

References

• Summaries
  All 8

  Phenotypes 1
• Earliest
  J:105741 Griffiths-Jones S, et al., miRBase: microRNA sequences, targets and gene nomenclature. Nucleic Acids Res. 2006 Jan 1;34(Database issue):D140-4
• Latest
  J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582