About   Help   FAQ
Ly6c2
Gene Detail
 Symbol
Name
ID
Ly6c2
lymphocyte antigen 6 complex, locus C2
MGI:3712069
Feature Type protein coding gene
Genetic Map
Chromosome 15
34.29 cM
Detailed Genetic Map ± 1 cM


Mapping data(1)
Sequence Map
Chr15:75108160-75111684 bp, - strand
From Ensembl annotation of GRCm38

  3525 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:113718  Vertebrate Homology Class
7 mouse; 6 rat

Gene Tree: Ly6c2

Alleles
and
phenotypes
Incidental mutations (data from Mutagenetix )
Gene Ontology
(GO)
classifications
All GO classifications: (3 annotations)
Component anchored component of membrane, membrane, ...
Expression
cDNA source data(20)
External Resources: GEO   ArrayExpress
Molecular
reagents
All nucleic(20) cDNA(20)
Other database
links
Ensembl Gene ModelENSMUSG00000022584 (Evidence)
Entrez Gene100041546 (Evidence)
UniGene482110
Consensus CDS ProjectCCDS49638.1
International Mouse Knockout Project StatusLy6c2
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000022584 Ensembl Gene Model | MGI Sequence Detail 3525 C57BL/6J ±  kb
transcript ENSMUST00000100542 Ensembl | MGI Sequence Detail 796 Not Applicable 
polypeptide ENSMUSP00000098110 Ensembl | MGI Sequence Detail 131 Not Applicable 

For the selected sequences
All sequences(9) RefSeq(2) UniProt(1)
Polymorphisms SNPs within 2kb(107 from dbSNP Build 137)    SNPs within 2kb including multiple locations(185)
Protein-related
information
ResourceIDDescription
InterPro IPR001526 CD59 antigen
InterPro IPR018363 CD59 antigen, conserved site
InterPro IPR016054 Ly-6 antigen / uPA receptor -like
Protein Ontology PR:000002980 lymphocyte antigen 6C2
References (Earliest) J:35255 Takikawa O, et al., Multiple expression of Ly-6C and accumulation of a Ly-6C pre-mRNA in activated macrophages involved in rejection of an allografted tumor. Biochem Biophys Res Commun. 1996 Sep 4;226(1):247-53
(Latest) J:191745 Ramachandran P, et al., Differential Ly-6C expression identifies the recruited macrophage phenotype, which orchestrates the regression of murine liver fibrosis. Proc Natl Acad Sci U S A. 2012 Nov 13;109(46):E3186-95
All references(14)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
07/15/2014
MGI 5.18
The Jackson Laboratory