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Rbx1-ps Pseudogene Detail
Summary
  • Symbol
    Rbx1-ps
  • Name
    ring-box 1, pseudogene
  • Synonyms
    Gm9840
Location &
Maps
more
  • Sequence Map
    Chr17:35935624-35935950 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 17, 18.78 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    1 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3710517
pseudogene Chr17:35935462-35936012 (-)
129S1/SvImJ MGP_129S1SvImJ_G0011345
pseudogene Chr17:36145207-36145533 (-)
A/J MGP_AJ_G0011333
pseudogene Chr17:35020985-35021311 (-)
AKR/J MGP_AKRJ_G0011297
pseudogene Chr17:35461401-35461727 (-)
BALB/cJ MGP_BALBcJ_G0011310
pseudogene Chr17:35168075-35168401 (-)
C3H/HeJ MGP_C3HHeJ_G0011198
pseudogene Chr17:35917221-35917547 (-)
C57BL/6NJ MGP_C57BL6NJ_G0011601
pseudogene Chr17:37627184-37627510 (-)
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0011016
pseudogene Chr17:36032811-36033137 (-)
CBA/J MGP_CBAJ_G0011178
pseudogene Chr17:39200074-39200400 (-)
DBA/2J MGP_DBA2J_G0011231
pseudogene Chr17:34327075-34327401 (-)
FVB/NJ MGP_FVBNJ_G0011231
pseudogene Chr17:34122687-34123013 (-)
LP/J MGP_LPJ_G0011312
pseudogene Chr17:36532743-36533069 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0011226
pseudogene Chr17:37965556-37965882 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0011578
pseudogene Chr17:35764879-35765205 (-)
PWK/PhJ MGP_PWKPhJ_G0010888
pseudogene Chr17:33184886-33185212 (-)
SPRET/EiJ MGP_SPRETEiJ_G0010713
pseudogene Chr17:33814218-33814544 (-)
WSB/EiJ MGP_WSBEiJ_G0011058
pseudogene Chr17:35923482-35923779 (-)



Homology
more
  • Human Ortholog
    RBX1, ring-box 1
  • Vertebrate Orthologs
    9
  • Human Ortholog
    RBX1, ring-box 1
    Orthology source: HomoloGene
  • Synonyms
    BA554C12.1, RNF75, ROC1
  • Links
    NCBI Gene ID: 9978
    neXtProt AC: NX_P62877
    UniProt: P62877

  • Chr Location
    22q13.2; chr22:40951347-40973015 (+)  GRCh38.p7

  • HomoloGene
    Vertebrate Homology Class 6872
    1 human;1 mouse;1 chimpanzee;1 cattle;1 dog;1 chicken;1 zebrafish;1 frog, western clawed;1 macaque, rhesus
  • HCOP
    human homology predictions: RBX1
  • Gene Tree
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Expression
less
Sequences &
Gene Models
less
  • All Sequences
  • RefSeq
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000049832 Ensembl Gene Model | MGI Sequence Detail 327 C57BL/6J ±  kb
transcript ENSMUST00000173786 Ensembl | MGI Sequence Detail 327 Not Applicable  
For the selected sequence
References
more
  • Summaries
    All 6
    Phenotypes 2
  • Earliest
    J:190754 Ermakova O, et al., Construction and phenotypic analysis of mice carrying a duplication of the major histocompatibility class I (MHC-I) locus. Mamm Genome. 2012 Aug;23(7-8):443-53

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/06/2018
MGI 6.13
The Jackson Laboratory