Gm14769 Pseudogene Detail

Summary

• Symbol
  Gm14769
• Name
  predicted gene 14769

• Feature Type
  pseudogene
  BioType Conflict
  
• IDs
  MGI:3708088
  NCBI Gene: 102638226
• Alliance
  gene page

Location &
Maps

• Sequence Map
  ChrX:83106939-83107370 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, 38.75 cM

Strain
Comparison

• SNPs within 2kb
  31 from dbSNP Build 142
• Strain Annotations
  16

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3708088	pseudogene	ChrX:83106930-83107437 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0014562	pseudogene	ChrX:80099538-80099969 (+)
A/J	MGP_AJ_G0014573	pseudogene	ChrX:80186634-80187065 (+)
AKR/J	MGP_AKRJ_G0014496	pseudogene	ChrX:82352970-82353401 (+)
BALB/cJ	MGP_BALBcJ_G0014525	pseudogene	ChrX:78969525-78969956 (+)
C3H/HeJ	MGP_C3HHeJ_G0014358	pseudogene	ChrX:80420949-80421380 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0015001	pseudogene	ChrX:82594132-82594563 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0013983	pseudogene	ChrX:65414153-65414583 (+)
CBA/J	MGP_CBAJ_G0014343	pseudogene	ChrX:84788215-84788646 (+)
DBA/2J	MGP_DBA2J_G0014423	pseudogene	ChrX:79641036-79641467 (+)
FVB/NJ	MGP_FVBNJ_G0014412	pseudogene	ChrX:79009072-79009503 (+)
LP/J	MGP_LPJ_G0014521	pseudogene	ChrX:80924161-80924592 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0014456	pseudogene	ChrX:88092378-88092809 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0014968	pseudogene	ChrX:79849359-79849790 (+)
PWK/PhJ	MGP_PWKPhJ_G0013789	pseudogene	ChrX:63460874-63461304 (+)
SPRET/EiJ	no annotation
WSB/EiJ	MGP_WSBEiJ_G0014059	pseudogene	ChrX:78764191-78764622 (+)

Homology

• Gene Tree
  Gm14769
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21
• RefSeq
  2

• Ensembl
  ENSMUSG00000081583 (Evidence)
• NCBI Gene
  102638226

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000081583	Ensembl Gene Model | MGI Sequence Detail	432	C57BL/6J
transcript	ENSMUST00000118590	Ensembl | MGI Sequence Detail	432	Not Applicable
polypeptide	XP_036018073	RefSeq | MGI Sequence Detail	146	C57BL/6J

References

• Summaries
  All 5
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;