Rpl10a-ps1 Pseudogene Detail

Summary

• Symbol
  Rpl10a-ps1
• Name
  ribosomal protein L10A, pseudogene 1
• Synonyms
  ENSMUSG00000061631, Gm15451

• Feature Type
  pseudogene
• IDs
  MGI:3705885
  NCBI Gene: 100043141
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr1:65033110-65033763 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, 32.80 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  11 from dbSNP Build 142
• Strain Annotations
  15

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3705885	pseudogene	Chr1:65033078-65033790 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0011663	pseudogene	Chr2:59858744-59860289 (-)
A/J	MGP_AJ_G0010173	pseudogene	Chr1:62889601-62890712 (-)
AKR/J	MGP_AKRJ_G0010983	pseudogene	Chr13:63671825-63672417 (-)
BALB/cJ	MGP_BALBcJ_G0011004	pseudogene	Chr13:62048201-62048793 (-)
C3H/HeJ	MGP_C3HHeJ_G0010903	pseudogene	Chr13:63198782-63199374 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0011934	pseudogene	Chr2:61619795-61620462 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0010725	pseudogene	Chr13:63213027-63213619 (-)
CBA/J	MGP_CBAJ_G0010874	pseudogene	Chr13:68559893-68560485 (-)
DBA/2J	MGP_DBA2J_G0010921	pseudogene	Chr13:61460944-61461536 (-)
FVB/NJ	MGP_FVBNJ_G0011557	pseudogene	Chr2:56702504-56703091 (-)
LP/J	MGP_LPJ_G0011621	pseudogene	Chr2:59709441-59710018 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0010916	pseudogene	Chr13:67515001-67515593 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0011926	pseudogene	Chr2:59163449-59165115 (-)
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	MGP_WSBEiJ_G0010771	pseudogene	Chr13:63468580-63469172 (-)

Homology

• Gene Tree
  Rpl10a-ps1
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Rpl10a-ps1
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  19
• RefSeq
  1

• Ensembl
  ENSMUSG00000084416 (Evidence)
• NCBI Gene
  100043141

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000084416	Ensembl Gene Model | MGI Sequence Detail	654	C57BL/6J
transcript	ENSMUST00000120360	Ensembl | MGI Sequence Detail	654	Not Applicable

Other
Accession IDs

MGI:3704188

References

• Summaries
  All 10

  Phenotypes 4
• Earliest
  J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
• Latest
  J:7938 Juriloff DM, et al., Genetic and developmental studies of a new mouse mutation that produces otocephaly. J Craniofac Genet Dev Biol. 1985;5(2):121-45

TSS for Rpl10a-ps1:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr11949	Chr1:65033792-65033799 (-)	-33 bp