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Defa-ps11 Pseudogene Detail
Summary
  • Symbol
    Defa-ps11
  • Name
    defensin, alpha, pseudogene 11
  • Synonyms
    OTTMUSG00000019982
Location &
Maps
more
  • Sequence Map
    Chr8:22239191-22240016 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 8, 10.35 cM
Strain
Comparison
more
  • SNPs within 2kb
    9 from dbSNP Build 142
  • Strain Annotations
    13
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3705879
 pseudogene Chr8:22239191-22240016 (+)
129S1/SvImJ MGP_129S1SvImJ_G0040666
 pseudogene Chr8:19527534-19528360 (+)
A/J MGP_AJ_G0040665
 pseudogene Chr8:18942230-18943056 (+)
AKR/J no annotation
BALB/cJ MGP_BALBcJ_G0040655
 pseudogene Chr8:19068160-19068986 (+)
C3H/HeJ no annotation
C57BL/6NJ MGP_C57BL6NJ_G0041354
 pseudogene Chr8:20376651-20377476 (+)
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0039327
 pseudogene Chr8:16769587-16770446 (-)
CBA/J no annotation
DBA/2J no annotation
FVB/NJ MGP_FVBNJ_G0040393
 pseudogene Chr8:18686207-18687033 (+)
LP/J MGP_LPJ_G0040507
 pseudogene Chr8:19561431-19562257 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0040395
 pseudogene Chr8:20839881-20840707 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0041397
 pseudogene Chr8:19454981-19455806 (+)
PWK/PhJ MGP_PWKPhJ_G0038985
 pseudogene Chr8:16352817-16353678 (-)
SPRET/EiJ MGP_SPRETEiJ_G0038694
 pseudogene Chr8:16604483-16605346 (-)
WSB/EiJ MGP_WSBEiJ_G0039583
 pseudogene Chr8:19593072-19593897 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype reference
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    17
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 100040739 NCBI Gene Model | MGI Sequence Detail 826 C57BL/6J ±  kb
For the selected sequence
References
more
  • Summaries
    All 6
    Phenotypes 1
  • Earliest
    J:332494 Dong X, et al., Keratinocyte-derived defensins activate neutrophil-specific receptors Mrgpra2a/b to prevent skin dysbiosis and bacterial infection. Immunity. 2022 Jul 15;55(9):1645-1662
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/30/2024
MGI 6.23 		The Jackson Laboratory