Gm15167 Pseudogene Detail

Summary

• Symbol
  Gm15167
• Name
  predicted gene 15167

• Feature Type
  pseudogene
• IDs
  MGI:3705805
• Alliance
  gene page

Location &
Maps

• Sequence Map
  ChrX:146516150-146516477 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, 68.46 cM

Strain
Comparison

• SNPs within 2kb
  6 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3705805	pseudogene	ChrX:146516150-146516477 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0040711	pseudogene	ChrX:145367746-145368073 (+)
A/J	MGP_AJ_G0040710	pseudogene	ChrX:144623462-144623789 (+)
AKR/J	MGP_AKRJ_G0040634	pseudogene	ChrX:149398103-149398430 (+)
BALB/cJ	MGP_BALBcJ_G0040702	pseudogene	ChrX:142843919-142844246 (+)
C3H/HeJ	MGP_C3HHeJ_G0040334	pseudogene	ChrX:145465224-145465551 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0041404	pseudogene	ChrX:149448578-149448905 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0037144	pseudogene	Chr13:60584240-60584621 (+)
CAST/EiJ	MGP_CASTEiJ_G0039377	pseudogene	ChrX:126001534-126001861 (+)
CBA/J	no annotation
DBA/2J	MGP_DBA2J_G0040519	pseudogene	ChrX:143674207-143674534 (+)
FVB/NJ	MGP_FVBNJ_G0040443	pseudogene	ChrX:142880056-142880383 (+)
LP/J	MGP_LPJ_G0040558	pseudogene	ChrX:146276129-146276456 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0040446	pseudogene	ChrX:162218220-162218547 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0041455	pseudogene	ChrX:144620060-144620387 (+)
PWK/PhJ	MGP_PWKPhJ_G0039025	pseudogene	ChrX:122735153-122735480 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0038743	pseudogene	ChrX:126494093-126494421 (+)
WSB/EiJ	MGP_WSBEiJ_G0039623	pseudogene	ChrX:142922439-142922766 (+)

Homology

• Gene Tree
  Gm15167
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00000084191 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000084191	Ensembl Gene Model | MGI Sequence Detail	328	C57BL/6J
transcript	ENSMUST00000121997	Ensembl | MGI Sequence Detail	187	Not Applicable

References

• Summaries
  All 3
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;